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Assembly Name: uagpf v2.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene52782 uagpf v2.0 313
AutoFact: SKP1 interacting partner 4 [Arabidopsis thaliana] sp|Q9M2C9.1|SKIP4_ARATH RecName: Full=F-box/kelch-repeat protein SKIP4; AltName: Full=SKP1-interacting partner 4 emb|CAB71065.1| putative protein [Arabidopsis thaliana] gb|ABF18998.1| At3g61350 [Arabidopsi 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene52850 uagpf v2.0 524
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
C-terminus
uagpf_v2_unigene52892 uagpf v2.0 422
AutoFact: Arginine/serine-rich splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SAR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor sf2 0.0
Internal
uagpf_v2_unigene52962 uagpf v2.0 394
AutoFact: Putative callose synthase catalytic subunit n=1 Tax=Gossypium hirsutum RepID=Q9XEG1_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 0.0
N-terminus
uagpf_v2_unigene53099 uagpf v2.0 323
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box kelch-repeat protein at1g80440-like 0.0
Internal
uagpf_v2_unigene53121 uagpf v2.0 298
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box protein At2g02240 gb|AEC05560.1| F-box protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein pp2-b15-like 1.50079e-42
N-terminus
uagpf_v2_unigene53279 uagpf v2.0 582
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene53346 uagpf v2.0 546
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q3EB08.1|FBK69_ARATH RecName: Full=F-box/kelch-repeat protein At3g24760 gb|AEE76944.1| F-box/kelch-repeat protein [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box/kelch-repeat protein At3g24760; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box kelch repeat-containing f-box family protein 0.0
C-terminus
uagpf_v2_unigene53771 uagpf v2.0 636
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene53776 uagpf v2.0 448
AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 2 0.0
Putative N-terminus
uagpf_v2_unigene54177 uagpf v2.0 340
AutoFact: putative phloem-specific lectin [Arabidopsis thaliana] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein pp2-b1 4.07811e-28
Internal
uagpf_v2_unigene54234 uagpf v2.0 638
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 4.0e-36
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 6.99949e-42
Internal
uagpf_v2_unigene54959 uagpf v2.0 477
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9M8L2.1|FBK30_ARATH RecName: Full=F-box/kelch-repeat protein At1g80440 gb|AAF27130.1|AC018849_18 unknown protein; 76867-75803 [Arabidopsis thaliana] gb|AAL38703.1| unknown protein [Arabidopsis thaliana 1.0e-37
Blast2go: f-box-like protein 0.0
unknown
uagpf_v2_unigene55017 uagpf v2.0 203
AutoFact: Unassigned protein
Blast2go: disease resistance protein 7.31522e-29
unknown
uagpf_v2_unigene55064 uagpf v2.0 269
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene55085 uagpf v2.0 347
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
Blast2go: f-box protein at1g67340-like 0.0
unknown
uagpf_v2_unigene55292 uagpf v2.0 475
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FLX3.1|FB293_ARATH RecName: Full=F-box protein At5g52880 dbj|BAB10436.1| unnamed protein product [Arabidopsis thaliana] gb|AAL06941.1| AT5g52880/MXC20_10 [Arabidopsis thaliana] gb|AAM91039.1| AT5g52880/MXC20_10 [A 1.99993e-41
Blast2go: skp1-interacting-like protein 0.0
Coding
uagpf_v2_unigene55483 uagpf v2.0 367
AutoFact: high mobility group B3 protein [Arabidopsis thaliana] sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High mobility group protein B 2; Short=AtHMGbeta2; Short=HMG beta 2; AltName: Full=Nucleosome/chromatin assembly fac 5.0e-12
Blast2go: high mobility group family 8.98127e-21
Putative coding
uagpf_v2_unigene55526 uagpf v2.0 358
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|O80582.2|FBK46_ARATH RecName: Full=F-box/kelch-repeat protein At2g44130 gb|AAL75886.1| At2g44130/F6E13.26 [Arabidopsis thaliana] gb|AAC23417.2| expressed protein [Arabidopsis thaliana] gb|AAM70552.1| At 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 0.0
N-terminus
uagpf_v2_unigene55743 uagpf v2.0 558
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain