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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4 uagpf v2.0 473
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 1.99993e-41
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
uagpf_v2_unigene9 uagpf v2.0 336
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
uagpf_v2_unigene67 uagpf v2.0 376
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene101 uagpf v2.0 581
AutoFact: YUCCA 9 protein [Arabidopsis thaliana] sp|O64489.1|YUC9_ARATH RecName: Full=Flavin-containing monooxygenase YUCCA9 gb|AAC16744.1| Contains similarity to myosin IB heavy chain gb|X70400 from Gallus gallus [Arabidopsis thaliana] gb|AEE27667.1| YUCCA 9 prote 5.0e-27
FL-Next: sp=Flavin-containing monooxygenase YUCCA9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: flavine-containing monoxygenase 2.07685e-32
N-terminus
uagpf_v2_unigene162 uagpf v2.0 655
AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AAL66968.1| unknown protein [Arabidopsis thaliana] gb|AAL91189.1| putative protein [Arabidopsis thaliana] gb|AAM20289.1| unknown protein [Arabidopsis thaliana] gb|AEE86087.1| C3H4 type zinc finger pr 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene203 uagpf v2.0 628
AutoFact: Unassigned protein
Blast2go: ring finger protein 0.0
unknown
uagpf_v2_unigene261 uagpf v2.0 1622
AutoFact: arabinose kinase [Arabidopsis thaliana] sp|O23461.1|ARAK_ARATH RecName: Full=L-arabinokinase; Short=AtISA1 emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana] emb|CAB78655.1| galactokinase like protein [Arabidopsis thaliana] gb|AEE83696.1| a 0.0
FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: galactokinase like protein 0.0
C-terminus
uagpf_v2_unigene477 uagpf v2.0 1488
AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AAL66968.1| unknown protein [Arabidopsis thaliana] gb|AAL91189.1| putative protein [Arabidopsis thaliana] gb|AAM20289.1| unknown protein [Arabidopsis thaliana] gb|AEE86087.1| C3H4 type zinc finger pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene485 uagpf v2.0 336
AutoFact: DUF616 domain containing protein 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene612 uagpf v2.0 1347
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R7Z4_RICCO 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene695 uagpf v2.0 838
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS95_RICCO 0.0
Blast2go: e3 ubiquitin-protein ligase at4g11680-like 0.0
unknown
uagpf_v2_unigene914 uagpf v2.0 1524
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Complete
uagpf_v2_unigene981 uagpf v2.0 344
AutoFact: RING-H2 finger protein ATL52 [Arabidopsis thaliana] sp|Q9LF64.1|ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52 emb|CAC01904.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] gb|AED92447.1| RING-H2 finger protein ATL52 [Arabidopsis thalian 1.0e-33
Blast2go: ring finger 0.0
unknown
uagpf_v2_unigene1092 uagpf v2.0 1249
AutoFact: ankyrin repeat-rich protein [Solanum tuberosum] 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase XBOS35; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ankyrin repeat-rich protein 0.0
Putative C-terminus
uagpf_v2_unigene1123 uagpf v2.0 1007
AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family-like protein 0.0
C-terminus
uagpf_v2_unigene1205 uagpf v2.0 232
AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 2.0e-30
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring u-box domain-containing protein 5.28428e-36
Internal
uagpf_v2_unigene1255 uagpf v2.0 1490
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene1267 uagpf v2.0 434
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 5.0e-28
Blast2go: e3 ubiquitin-protein ligase at3g02290-like 1.45997e-32
unknown
uagpf_v2_unigene1343 uagpf v2.0 908
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUV3_RICCO 1.0e-30
Blast2go: protein 2.31492e-35
unknown
uagpf_v2_unigene1390 uagpf v2.0 575
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ariadne- 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain