Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene54738 uagpf v2.0 309
AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Internal
uagpf_v2_unigene55058 uagpf v2.0 506
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.6633e-24
Putative C-terminus
uagpf_v2_unigene55086 uagpf v2.0 479
AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.5849e-29
Putative Complete
uagpf_v2_unigene55288 uagpf v2.0 234
AutoFact: Unassigned protein
Blast2go: zinc finger 0.0
unknown
uagpf_v2_unigene55349 uagpf v2.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
uagpf_v2_unigene55361 uagpf v2.0 330
AutoFact: RING finger and CHY zinc finger domain-containing protein 1 n=2 Tax=Zea mays RepID=B6T4N6_MAIZE 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1 1.52761e-23
Internal
uagpf_v2_unigene55466 uagpf v2.0 499
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl2-like 0.0
Putative N-terminus
uagpf_v2_unigene55524 uagpf v2.0 466
AutoFact: RING-H2 subgroup RHE protein [Populus tremula x Populus alba] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
C-terminus
uagpf_v2_unigene55586 uagpf v2.0 334
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Internal
uagpf_v2_unigene55609 uagpf v2.0 342
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein 0.0
Internal
uagpf_v2_unigene55627 uagpf v2.0 418
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein 0_2658_01 [Pinus radiata] 2.14658e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain