Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene48362 uagpf v2.0 320
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal
uagpf_v2_unigene48789 uagpf v2.0 412
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: brca1-associated protein 0.0
Internal
uagpf_v2_unigene49049 uagpf v2.0 274
• AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
uagpf_v2_unigene49067 uagpf v2.0 400
• AutoFact: Putative zinc finger protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6L4V6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l11 methyltransferase 0.0
C-terminus
uagpf_v2_unigene49325 uagpf v2.0 237
• AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93462.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 0.0
• Blast2go: ring finger and chy zinc finger domain-containing protein 0.0
Putative coding
uagpf_v2_unigene49732 uagpf v2.0 657
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R7Z4_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene49833 uagpf v2.0 506
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
C-terminus
uagpf_v2_unigene49838 uagpf v2.0 580
• AutoFact: E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana] sp|Q9M2S6.1|SDIR1_ARATH RecName: Full=E3 ubiquitin-protein ligase SDIR1; AltName: Full=Protein salt- and drought-induced RING finger1 gb|AAK62440.1|AF386995_1 putative protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
N-terminus
uagpf_v2_unigene49874 uagpf v2.0 384
• AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
• Blast2go: ccch-type zinc finger protein c3h69 0.0
unknown
uagpf_v2_unigene49881 uagpf v2.0 476
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
uagpf_v2_unigene49978 uagpf v2.0 509
• AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
• FL-Next: tr=OSIGBa0142I02-OSIGBa0101B20.23 protein; Oryza sativa (Rice). 0.0
• Blast2go: ring finger 0.0
C-terminus
uagpf_v2_unigene49986 uagpf v2.0 195
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 3.0e-39
• Blast2go: ring finger protein 0.0
unknown
uagpf_v2_unigene50106 uagpf v2.0 502
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene50118 uagpf v2.0 589
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
N-terminus
uagpf_v2_unigene50144 uagpf v2.0 470
• AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
N-terminus
uagpf_v2_unigene50156 uagpf v2.0 568
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 4.0e-28
• Blast2go: zinc finger family-like protein 0.0
unknown
uagpf_v2_unigene50175 uagpf v2.0 352
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene50302 uagpf v2.0 451
• AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Internal
uagpf_v2_unigene50320 uagpf v2.0 394
• AutoFact: pfam07002, Copine, Copine 6.99949e-42
• Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
unknown
uagpf_v2_unigene50325 uagpf v2.0 467
• AutoFact: YDG_SRA multi-domain protein 0.0
• Blast2go: zinc finger 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain