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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46447 uagpf v2.0 347
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
Coding
uagpf_v2_unigene46520 uagpf v2.0 432
AutoFact: C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] dbj|BAB09828.1| unnamed protein product [Arabidopsis thaliana] gb|AED93123.1| C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.30637e-34
N-terminus
uagpf_v2_unigene46621 uagpf v2.0 354
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46801 uagpf v2.0 262
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
Blast2go: ring u-box domain-containing protein 8.79016e-28
Coding
uagpf_v2_unigene46854 uagpf v2.0 361
AutoFact: Putative RING zinc finger protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX96_PINPS 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin ligase-like protein 0.0
C-terminus
uagpf_v2_unigene46980 uagpf v2.0 427
AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 0.0
Internal
uagpf_v2_unigene47295 uagpf v2.0 332
AutoFact: E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana] sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL41; AltName: Full=RING-H2 finger protein ATL41 gb|AAD23719.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAL6946 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger protein 4.97741e-42
C-terminus
uagpf_v2_unigene47610 uagpf v2.0 349
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.41584e-19
Putative N-terminus
uagpf_v2_unigene47642 uagpf v2.0 279
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Putative N-terminus
uagpf_v2_unigene47713 uagpf v2.0 218
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
Internal
uagpf_v2_unigene47934 uagpf v2.0 155
AutoFact: RING-H2 finger protein RHA1a [Arabidopsis thaliana] gb|AAM63325.1| RING-H2 finger protein RHA1a-like protein [Arabidopsis thaliana] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g63840 3.32362e-20
Putative C-terminus
uagpf_v2_unigene47944 uagpf v2.0 136
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Zinc ion binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Internal
uagpf_v2_unigene47964 uagpf v2.0 481
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 9.72424e-21
Internal
uagpf_v2_unigene48025 uagpf v2.0 312
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g13530-like protein 0.0
Internal
uagpf_v2_unigene48121 uagpf v2.0 254
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 3.00018e-42
FL-Next: sp=E3 ubiquitin-protein ligase CIP8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
uagpf_v2_unigene48184 uagpf v2.0 283
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
uagpf_v2_unigene48242 uagpf v2.0 381
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48308 uagpf v2.0 244
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAO00881.1| putative protein [Arabidopsis thaliana] gb|AAP37815.1| At5g63780 [Arabidopsis thaliana] gb|AED97797.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 5.0e-35
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Internal
uagpf_v2_unigene48334 uagpf v2.0 437
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T1L9_VITVI 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
N-terminus
uagpf_v2_unigene48346 uagpf v2.0 339
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SZY8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain