Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene43627 uagpf v2.0 227
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAD10644.1| Unknown protein [Arabidopsis thaliana] gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAN18071.1| At1g 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
unknown
uagpf_v2_unigene43928 uagpf v2.0 498
AutoFact: JmjC domain containing protein 3.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Internal
uagpf_v2_unigene44053 uagpf v2.0 241
AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene44213 uagpf v2.0 271
AutoFact: RING-H2 finger protein ATL47 n=2 Tax=Arabidopsis RepID=ATL47_ARATH 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.93203e-16
C-terminus
uagpf_v2_unigene44364 uagpf v2.0 105
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Internal
uagpf_v2_unigene44572 uagpf v2.0 344
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAC06154.1| expressed protein [Arabidopsis thaliana] gb|AAO00741.1| Unknown protein [Arabidopsis thaliana] gb|AAP13386.1| At2g45530 [Arabidopsis thaliana] gb|AEC10566.1| RING/U-box domain-cont 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.58268e-23
Internal
uagpf_v2_unigene44658 uagpf v2.0 342
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
Internal
uagpf_v2_unigene44685 uagpf v2.0 257
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S1W6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at5g49770-like 0.0
Internal
uagpf_v2_unigene44784 uagpf v2.0 402
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Putative N-terminus
uagpf_v2_unigene44907 uagpf v2.0 258
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAO42065.1| unknown protein [Arabidopsis thaliana] gb|AAO50515.1| unknown protein [Arabidopsis thaliana] gb|AEC07265.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Internal
uagpf_v2_unigene44923 uagpf v2.0 354
AutoFact: zinc transporter, putative [Asparagus officinalis] 0.0
Blast2go: zinc transporter 0.0
unknown
uagpf_v2_unigene44948 uagpf v2.0 108
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 2.0e-37
Blast2go: e3 ubiquitin-protein ligase atl6-like 0.0
unknown
uagpf_v2_unigene45098 uagpf v2.0 378
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.72903e-12
C-terminus
uagpf_v2_unigene45274 uagpf v2.0 424
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
N-terminus
uagpf_v2_unigene45398 uagpf v2.0 401
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-21
Blast2go: protein 2.6633e-24
unknown
uagpf_v2_unigene45584 uagpf v2.0 294
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
Blast2go: ring u-box domain-containing protein 8.79016e-28
Coding
uagpf_v2_unigene46018 uagpf v2.0 262
AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
Internal
uagpf_v2_unigene46030 uagpf v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb10g025050; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46201 uagpf v2.0 402
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.04467e-44
C-terminus
uagpf_v2_unigene46271 uagpf v2.0 418
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.81153e-21
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain