Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene41432 uagpf v2.0 517
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T0P2_RICCO 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring finger and transmembrane domain-containing protein 2-like 0.0
Internal
uagpf_v2_unigene41472 uagpf v2.0 297
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.64059e-36
N-terminus
uagpf_v2_unigene41590 uagpf v2.0 287
• AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
uagpf_v2_unigene41677 uagpf v2.0 454
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
N-terminus
uagpf_v2_unigene41724 uagpf v2.0 376
• AutoFact: IBR domain containing protein [Arabidopsis thaliana] emb|CAB75476.1| putative protein [Arabidopsis thaliana] gb|AEE78034.1| IBR domain containing protein [Arabidopsis thaliana] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
C-terminus
uagpf_v2_unigene42069 uagpf v2.0 255
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 4.0e-27
• Blast2go: protein binding 7.3696e-31
Coding
uagpf_v2_unigene42091 uagpf v2.0 283
• AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
• FL-Next: tr=Protein SUA5, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: ischemia reperfusion inducible protein 0.0
N-terminus
uagpf_v2_unigene42346 uagpf v2.0 326
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene42399 uagpf v2.0 319
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S456_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin-like protein 0.0
Internal
uagpf_v2_unigene42522 uagpf v2.0 149
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
• Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene42542 uagpf v2.0 255
• AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Internal
uagpf_v2_unigene42644 uagpf v2.0 329
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDX8_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: potyviral helper component protease-interacting protein 1 2.89647e-30
Internal
uagpf_v2_unigene42810 uagpf v2.0 370
• AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger family protein 0.0
Internal
uagpf_v2_unigene42828 uagpf v2.0 202
• AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase ring1a-like 0.0
N-terminus
uagpf_v2_unigene42948 uagpf v2.0 329
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SLY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene42984 uagpf v2.0 225
• AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU82_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
C-terminus
uagpf_v2_unigene43026 uagpf v2.0 433
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SMC2_RICCO 2.0e-38
• FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein binding 3.61535e-43
Internal
uagpf_v2_unigene43031 uagpf v2.0 306
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AED91346.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring fyve phd zinc finger-containing protein 0.0
Internal
uagpf_v2_unigene43107 uagpf v2.0 321
• AutoFact: hercules receptor kinase 2 [Arabidopsis thaliana] sp|Q9SA72.1|Y1357_ARATH RecName: Full=Probable receptor-like protein kinase At1g30570; Flags: Precursor gb|AAD25744.1|AC007060_2 Contains eukaryotic protein kinase domain PF|00069 [Arabidopsis thaliana] gb 8.99999e-40
• FL-Next: sp=Probable receptor-like protein kinase At1g30570; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: feronia-like protein 0.0
Internal
uagpf_v2_unigene43126 uagpf v2.0 279
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 7.3696e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain