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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene35908 uagpf v2.0 246
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK96689.1| Unknown protein [Arabidopsis thaliana] gb|AAP37763.1| At1g04790 [Arabidopsis thaliana] gb|AEE27744.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene35910 uagpf v2.0 345
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Internal
uagpf_v2_unigene35920 uagpf v2.0 160
• AutoFact: RING-H2 finger protein ATL58 [Arabidopsis thaliana] sp|Q570X5.1|ATL58_ARATH RecName: Full=RING-H2 finger protein ATL58 dbj|BAD94869.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31599.1| RING-H2 finger protein ATL58 [Arabidopsis thaliana] 7.0e-34
• Blast2go: ring-h2 finger protein atl7-like 0.0
unknown
uagpf_v2_unigene35948 uagpf v2.0 617
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein binding 0.0
Internal
uagpf_v2_unigene35953 uagpf v2.0 86
• AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyltransferase pmt20 0.0
Internal
uagpf_v2_unigene36077 uagpf v2.0 625
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
N-terminus
uagpf_v2_unigene36095 uagpf v2.0 590
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Putative N-terminus
uagpf_v2_unigene36161 uagpf v2.0 545
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene36229 uagpf v2.0 509
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 0.0
• Blast2go: ring finger protein 0.0
unknown
uagpf_v2_unigene36231 uagpf v2.0 648
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
uagpf_v2_unigene36268 uagpf v2.0 621
• AutoFact: putative protein kinase [Arabidopsis thaliana] gb|AAC04483.1| putative protein kinase [Arabidopsis thaliana] 1.0e-37
• FL-Next: sp=Receptor like protein kinase S.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: receptor like protein kinase -like 0.0
C-terminus
uagpf_v2_unigene36281 uagpf v2.0 584
• AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
• Blast2go: cleavage and polyadenylation specificity 0.0
unknown
uagpf_v2_unigene36295 uagpf v2.0 619
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6K7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rnf167-like 0.0
N-terminus
uagpf_v2_unigene36350 uagpf v2.0 492
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-29
• Blast2go: zinc c3hc4 type family protein 0.0
Coding
uagpf_v2_unigene36435 uagpf v2.0 560
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
• Blast2go: ring u-box domain-containing protein 0.0
unknown
uagpf_v2_unigene36498 uagpf v2.0 454
• AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-32
• Blast2go: zinc c3hc4 type family protein 2.6244e-35
unknown
uagpf_v2_unigene36526 uagpf v2.0 563
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
C-terminus
uagpf_v2_unigene36531 uagpf v2.0 458
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
N-terminus
uagpf_v2_unigene36579 uagpf v2.0 394
• AutoFact: E3 ubiquitin-protein ligase ATL23 [Arabidopsis thaliana] sp|Q8L9W3.2|ATL23_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL23; AltName: Full=RING-H2 finger protein ATL23 dbj|BAB08453.1| unnamed protein product [Arabidopsis thaliana] gb|AAO41888.1| unkn 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase atl23 0.0
C-terminus
uagpf_v2_unigene36617 uagpf v2.0 513
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyltransferase pmt3 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain