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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1393 uagpf v2.0 539
AutoFact: Zinc finger (C3HC4-type RING finger)protein-like n=4 Tax=Poaceae RepID=Q67WE0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g025050; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene1397 uagpf v2.0 895
AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-15
Blast2go: protein 7.79632e-16
Putative coding
uagpf_v2_unigene1415 uagpf v2.0 1377
AutoFact: NEP1-interacting protein-like 2 [Arabidopsis thaliana] sp|Q8LBA0.2|NIPL2_ARATH RecName: Full=NEP1-interacting protein-like 2; AltName: Full=RING-H2 finger protein ATL24 gb|AAK91449.1| At1g74410/F1M20_9 [Arabidopsis thaliana] gb|AAM10413.1| At1g74410/F1M20 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl1q 0.0
Complete
uagpf_v2_unigene1441 uagpf v2.0 1083
AutoFact: YDG_SRA multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
C-terminus
uagpf_v2_unigene1499 uagpf v2.0 426
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
unknown
uagpf_v2_unigene1516 uagpf v2.0 1951
AutoFact: Kinase, putative n=2 Tax=rosids RepID=B9SRU2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: feronia receptor-like kinase 0.0
Complete
uagpf_v2_unigene1692 uagpf v2.0 780
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene1717 uagpf v2.0 555
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S1E3_PHYPA 7.0e-38
FL-Next: sp=RING-H2 finger protein ATL67; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring-h2 finger protein atl2m 0.0
C-terminus
uagpf_v2_unigene1727 uagpf v2.0 580
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
uagpf_v2_unigene1867 uagpf v2.0 1757
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 63-like 0.0
Complete
uagpf_v2_unigene1897 uagpf v2.0 771
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
N-terminus
uagpf_v2_unigene1946 uagpf v2.0 968
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene1962 uagpf v2.0 1189
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Complete
uagpf_v2_unigene1995 uagpf v2.0 567
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene2196 uagpf v2.0 2308
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin-like protein 0.0
Putative Complete
uagpf_v2_unigene2280 uagpf v2.0 1034
AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Complete
uagpf_v2_unigene2283 uagpf v2.0 1190
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] dbj|BAE98370.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30249.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c3hc4-type ring finger protein 0.0
Complete
uagpf_v2_unigene2284 uagpf v2.0 799
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein 0.0
C-terminus
uagpf_v2_unigene2303 uagpf v2.0 623
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
Blast2go: protein phosphatase 0.0
unknown
uagpf_v2_unigene2325 uagpf v2.0 770
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R7Z4_RICCO 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain