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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19865 uagpf v2.0 721
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rha1b-like 1.75794e-33
C-terminus
uagpf_v2_unigene19867 uagpf v2.0 912
AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Putative Complete
uagpf_v2_unigene19925 uagpf v2.0 368
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1 6.5861e-44
Internal
uagpf_v2_unigene20080 uagpf v2.0 1217
AutoFact: RING-H2 subgroup RHE protein [Populus tremula x Populus alba] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
Complete
uagpf_v2_unigene20106 uagpf v2.0 705
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein 0.0
Putative C-terminus
uagpf_v2_unigene20152 uagpf v2.0 874
AutoFact: Anaphase-promoting complex subunit 11 n=8 Tax=Magnoliophyta RepID=APC11_ARATH 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anaphase-promoting complex subunit 11 0.0
Complete
uagpf_v2_unigene20253 uagpf v2.0 1896
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
N-terminus
uagpf_v2_unigene24988 uagpf v2.0 324
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
unknown
uagpf_v2_unigene25014 uagpf v2.0 436
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
unknown
uagpf_v2_unigene25039 uagpf v2.0 442
AutoFact: Unassigned protein
unknown
uagpf_v2_unigene25124 uagpf v2.0 596
AutoFact: dehydrodolichyl diphosphate synthase 2 [Arabidopsis thaliana] sp|Q56Y11.2|DDPS2_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 2; Short=Dedol-PP synthase 2 dbj|BAA97345.1| unnamed protein product [Arabidopsis thaliana] gb|ACI31313.1| At5g58770 [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene25133 uagpf v2.0 423
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene25151 uagpf v2.0 521
AutoFact: E3 ubiquitin-protein ligase DTX3L [Rattus norvegicus] gb|EDM11302.1| similar to deltex 3-like (predicted) [Rattus norvegicus] 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase dtx3l 0.0
Internal
uagpf_v2_unigene25203 uagpf v2.0 628
AutoFact: pfam05495, zf-CHY, CHY zinc finger 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: zinc finger 0.0
C-terminus
uagpf_v2_unigene25248 uagpf v2.0 245
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB09677.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21185.1| At5g05830 [Arabidopsis thaliana] dbj|BAE99517.1| hypothetical protein [Arabidopsis thaliana] gb|AED90930.1| R 1.0e-17
Blast2go: zinc finger 0.0
unknown
uagpf_v2_unigene25257 uagpf v2.0 269
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rfwd3-like 1.56826e-14
Internal
uagpf_v2_unigene25318 uagpf v2.0 504
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 1.30938e-16
N-terminus
uagpf_v2_unigene25357 uagpf v2.0 504
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin-like protein 0.0
Internal
uagpf_v2_unigene25411 uagpf v2.0 442
AutoFact: Armadillo/beta-catenin repeat protein-like n=2 Tax=Oryza sativa RepID=Q6Z6H7_ORYSJ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene25435 uagpf v2.0 461
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain