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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene17149 uagpf v2.0 833
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Putative Complete
uagpf_v2_unigene17189 uagpf v2.0 580
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 0.0
• Blast2go: ring finger and chy zinc finger domain-containing protein 1-like 0.0
unknown
uagpf_v2_unigene17365 uagpf v2.0 1003
• AutoFact: RecName: Full=Probable protein phosphatase 2C 43; Short=OsPP2C43 emb|CAD41383.2| OSJNBa0088A01.23 [Oryza sativa Japonica Group] gb|EAY95304.1| hypothetical protein OsI_17129 [Oryza sativa Indica Group] gb|EAZ31769.1| hypothetical protein OsJ_15921 [Oryza 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.42167e-37
C-terminus
uagpf_v2_unigene17428 uagpf v2.0 1946
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6K7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rnf167-like 0.0
C-terminus
uagpf_v2_unigene17444 uagpf v2.0 718
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAO00881.1| putative protein [Arabidopsis thaliana] gb|AAP37815.1| At5g63780 [Arabidopsis thaliana] gb|AED97797.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 4.0e-19
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring fyve phd zinc finger-containing protein 1.9099e-22
C-terminus
uagpf_v2_unigene17461 uagpf v2.0 582
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase atl6-like 0.0
C-terminus
uagpf_v2_unigene17474 uagpf v2.0 815
• AutoFact: pfam08241, Methyltransf_11, Methyltransferase domain 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene17562 uagpf v2.0 761
• AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
C-terminus
uagpf_v2_unigene17580 uagpf v2.0 1169
• AutoFact: protease-associated and C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] gb|AAL38826.1| unknown protein [Arabidopsis thaliana] gb|AAM91777.1| unknown protein [Arabidopsis thaliana] gb|AEE35260.1| protease-associated and C3HC4-type R 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rnf167-like 0.0
C-terminus
uagpf_v2_unigene17596 uagpf v2.0 1039
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent helicase rhp16-like 0.0
Putative C-terminus
uagpf_v2_unigene17597 uagpf v2.0 428
• AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene17658 uagpf v2.0 1791
• AutoFact: DUF1117 multi-domain protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
C-terminus
uagpf_v2_unigene17771 uagpf v2.0 714
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin-like protein 0.0
Complete
uagpf_v2_unigene17816 uagpf v2.0 413
• AutoFact: 60S ribosomal protein L7a n=11 Tax=Poaceae RepID=RL7A_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l7a 0.0
N-terminus
uagpf_v2_unigene17947 uagpf v2.0 699
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
C-terminus
uagpf_v2_unigene17972 uagpf v2.0 671
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
uagpf_v2_unigene17985 uagpf v2.0 784
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TQ32_VITVI 2.0e-39
• FL-Next: tr=Hydroxyproline-rich glycoprotein-like; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: hydroxyproline-rich glycoprotein family protein 1.4013e-45
Internal
uagpf_v2_unigene18066 uagpf v2.0 755
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene18079 uagpf v2.0 833
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB36_RICCO 0.0
• Blast2go: e3 ubiquitin-protein ligase sis3-like 0.0
Putative coding
uagpf_v2_unigene18111 uagpf v2.0 570
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 8.0e-35
• Blast2go: ring finger 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain