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Assembly Name: uagpf v2.0

Name: Zinc finger, C6HC-type

Term: IPR002867  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene485 uagpf v2.0 336
AutoFact: DUF616 domain containing protein 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene1390 uagpf v2.0 575
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ariadne- 0.0
Putative N-terminus
uagpf_v2_unigene1603 uagpf v2.0 660
AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like 0.0
C-terminus
uagpf_v2_unigene3153 uagpf v2.0 649
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
Internal
uagpf_v2_unigene3247 uagpf v2.0 608
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene3309 uagpf v2.0 762
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5294 uagpf v2.0 596
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 9.99995e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene6601 uagpf v2.0 1282
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078409.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAA19684.1| putative protein [Arabidopsis thaliana] emb|CAB78969.1| putative protein [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene7585 uagpf v2.0 1620
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078409.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAA19684.1| putative protein [Arabidopsis thaliana] emb|CAB78969.1| putative protein [Arabidopsis thaliana] gb| 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene7593 uagpf v2.0 396
AutoFact: IBR domain containing protein 7.0e-07
Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like 0.0
Putative coding
uagpf_v2_unigene7652 uagpf v2.0 1075
AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 51 0.0
C-terminus
uagpf_v2_unigene8305 uagpf v2.0 411
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078409.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAA19684.1| putative protein [Arabidopsis thaliana] emb|CAB78969.1| putative protein [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene8443 uagpf v2.0 664
AutoFact: DUF616 domain containing protein 0.0
FL-Next: tr=AT5g42660/MJB21_3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene11662 uagpf v2.0 491
AutoFact: Putative RING zinc finger protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S5X9_ORYSJ 1.0e-14
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ariadne- 2.44575e-16
N-terminus
uagpf_v2_unigene11734 uagpf v2.0 528
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
C-terminus
uagpf_v2_unigene15563 uagpf v2.0 946
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene15854 uagpf v2.0 248
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
Blast2go: abscisic acid receptor pyr1 0.0
Putative coding
uagpf_v2_unigene16291 uagpf v2.0 915
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ring finger 0.0
C-terminus
uagpf_v2_unigene19321 uagpf v2.0 1812
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: sp=Abscisic acid receptor PYR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abscisic acid receptor pyl2-like 0.0
Complete
uagpf_v2_unigene26116 uagpf v2.0 243
AutoFact: IBR domain containing protein 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain