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Assembly Name: uagpf v2.0

Name: U box domain

Term: IPR003613  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene15039 uagpf v2.0 384
• AutoFact: U-box multi-domain protein 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene15885 uagpf v2.0 1128
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 30-like 0.0
C-terminus
uagpf_v2_unigene16120 uagpf v2.0 590
• AutoFact: Cyclin B, putative n=1 Tax=Ricinus communis RepID=B9R8N2_RICCO 0.0
• Blast2go: cyclin 0.0
Coding
uagpf_v2_unigene16295 uagpf v2.0 818
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
C-terminus
uagpf_v2_unigene16617 uagpf v2.0 1183
• AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub59 0.0
N-terminus
uagpf_v2_unigene17346 uagpf v2.0 1101
• AutoFact: U-box multi-domain protein 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene17558 uagpf v2.0 653
• AutoFact: Cyclin B, putative n=1 Tax=Ricinus communis RepID=B9R8N2_RICCO 0.0
• Blast2go: cyclin 0.0
unknown
uagpf_v2_unigene18137 uagpf v2.0 1283
• AutoFact: U-box domain-containing protein 25 [Arabidopsis thaliana] sp|Q9LT79.1|PUB25_ARATH RecName: Full=U-box domain-containing protein 25; AltName: Full=Plant U-box protein 25 dbj|BAB02462.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63504.1| unknown 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 0.0
C-terminus
uagpf_v2_unigene25260 uagpf v2.0 483
• AutoFact: E3 ubiquitin-protein ligase PUB22 n=3 Tax=Brassicaceae RepID=PUB22_ARATH 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene25472 uagpf v2.0 553
• AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Putative C-terminus
uagpf_v2_unigene25507 uagpf v2.0 415
• AutoFact: Cyclin n=1 Tax=Adiantum capillus-veneris RepID=Q96226_ADICA 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene25960 uagpf v2.0 392
• AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub59 0.0
Internal
uagpf_v2_unigene26308 uagpf v2.0 218
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAB40988.1| putative protein [Arabidopsis thaliana] emb|CAB78313.1| putative protein [Arabidopsis thaliana] dbj|BAF00854.1| hypothetical protein [Arabidopsis thaliana] gb|ABH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 4-like 0.0
Putative C-terminus
uagpf_v2_unigene26580 uagpf v2.0 355
• AutoFact: cyclin B1 [Nicotiana tabacum] 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene26877 uagpf v2.0 323
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T786_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene26973 uagpf v2.0 520
• AutoFact: Similar to protein serine/threonine kinase NPK15 gb|D31737 from Nicotiana tabacum [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 0.0
Putative Complete
uagpf_v2_unigene27322 uagpf v2.0 553
• AutoFact: KAP multi-domain protein 6.0e-08
• Blast2go: u-box domain-containing protein 4-like 0.0
unknown
uagpf_v2_unigene27791 uagpf v2.0 511
• AutoFact: putative ubiquitin conjugation factor E4 [Arabidopsis thaliana] sp|Q9LF41.1|UBE4_ARATH RecName: Full=Probable ubiquitin conjugation factor E4; AltName: Full=Plant U-box protein 1; AltName: Full=U-box domain-containing protein 1; AltName: Full=Ubiquitin-fu 0.0
• FL-Next: sp=Probable ubiquitin conjugation factor E4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable ubiquitin conjugation factor e4-like 0.0
Internal
uagpf_v2_unigene28056 uagpf v2.0 342
• AutoFact: U-box multi-domain protein 3.0e-20
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene28094 uagpf v2.0 476
• AutoFact: cyclin [Adiantum capillus-veneris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain