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Assembly Name: uagpf v2.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41726 uagpf v2.0 436
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9S2Y0_RICCO 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like 0.0
unknown
uagpf_v2_unigene41882 uagpf v2.0 161
AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
uagpf_v2_unigene42124 uagpf v2.0 347
AutoFact: phosphoinositide 4-kinase gamma 7 [Arabidopsis thaliana] gb|AAL06989.1| At2g03890/T18C20.9 [Arabidopsis thaliana] gb|AAD24822.2| expressed protein [Arabidopsis thaliana] gb|AAO11612.1| At2g03890/T18C20.9 [Arabidopsis thaliana] gb|AEC05763.1| phosphoinosit 2.0e-27
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol 3-and 4-kinase family protein 1.5643e-35
Internal
uagpf_v2_unigene42949 uagpf v2.0 223
AutoFact: initiator-binding protein [Zea mays] 0.0
unknown
uagpf_v2_unigene43216 uagpf v2.0 237
AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-18
Blast2go: ubiquitin-like protein smt3 1.12748e-23
unknown
uagpf_v2_unigene44249 uagpf v2.0 357
AutoFact: ubiquitin family protein [Arabidopsis thaliana] gb|AAM98085.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AAP21172.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AED94781.1| ubiquitin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene44635 uagpf v2.0 313
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
Putative coding
uagpf_v2_unigene45705 uagpf v2.0 441
AutoFact: initiator-binding protein [Zea mays] 0.0
Putative coding
uagpf_v2_unigene46168 uagpf v2.0 110
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
Blast2go: polyubiquitin 0.0
unknown
uagpf_v2_unigene46174 uagpf v2.0 499
AutoFact: initiator-binding protein [Zea mays] 0.0
FL-Next: sp=Telomere repeat-binding protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene46244 uagpf v2.0 212
AutoFact: Inositol or phosphatidylinositol kinase, putative n=1 Tax=Ricinus communis RepID=B9RLG3_RICCO 0.0
Blast2go: probable phosphatidylinositol 4-kinase type 2-beta at1g26270-like 0.0
Coding
uagpf_v2_unigene46501 uagpf v2.0 419
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 3.0e-18
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 1.73916e-26
N-terminus
uagpf_v2_unigene47350 uagpf v2.0 142
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene48305 uagpf v2.0 387
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 4.0e-20
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: ubiquitin 1.50703e-25
Complete
uagpf_v2_unigene49352 uagpf v2.0 235
AutoFact: DNA damage-inducible protein 1 [Arabidopsis thaliana] ref|NP_001189877.1| DNA damage-inducible protein 1 [Arabidopsis thaliana] gb|ABG25069.1| At3g13235 [Arabidopsis thaliana] dbj|BAE98897.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75323.1| DNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna damage-inducible protein 1 0.0
Internal
uagpf_v2_unigene49377 uagpf v2.0 399
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
unknown
uagpf_v2_unigene49962 uagpf v2.0 558
AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: probable phosphatidylinositol 4-kinase type 2-beta at1g26270-like 0.0
Internal
uagpf_v2_unigene50419 uagpf v2.0 345
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
C-terminus
uagpf_v2_unigene50499 uagpf v2.0 327
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 3.02793e-38
N-terminus
uagpf_v2_unigene50559 uagpf v2.0 535
AutoFact: Inositol or phosphatidylinositol kinase, putative n=1 Tax=Ricinus communis RepID=B9RLG3_RICCO 1.0e-16
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol 4-kinase type 2-beta 2.43254e-19
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain