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Assembly Name: uagpf v2.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20522 uagpf v2.0 1034
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
uagpf_v2_unigene20525 uagpf v2.0 821
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Ubiquitin; Hevea brasiliensis (Para rubber tree) (Siphonia brasiliensis). 0.0
Blast2go: hexaubiquitin protein 0.0
Complete
uagpf_v2_unigene20526 uagpf v2.0 703
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene20527 uagpf v2.0 659
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
uagpf_v2_unigene20528 uagpf v2.0 566
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 3 0.0
Putative Complete
uagpf_v2_unigene20529 uagpf v2.0 426
AutoFact: polyubiquitin [Volvox carteri f. nagariensis] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 3 0.0
Putative Complete
uagpf_v2_unigene20530 uagpf v2.0 533
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Polyubiquitin; Volvox carteri (Green alga). 0.0
Blast2go: hexaubiquitin protein 0.0
Complete
uagpf_v2_unigene20531 uagpf v2.0 369
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene20532 uagpf v2.0 476
AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
uagpf_v2_unigene20533 uagpf v2.0 527
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 0.0
Internal
uagpf_v2_unigene20534 uagpf v2.0 751
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene25112 uagpf v2.0 789
AutoFact: Phosphatidylinositol 3-and 4-kinase, catalytic n=1 Tax=Medicago truncatula RepID=A2Q630_MEDTR 0.0
FL-Next: tr=Phosphatidylinositol 3-and 4-kinase, catalytic; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: phosphatidylinositol 3-and 4-kinase family protein 0.0
C-terminus
uagpf_v2_unigene25132 uagpf v2.0 474
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
Putative coding
uagpf_v2_unigene26355 uagpf v2.0 621
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus
uagpf_v2_unigene27520 uagpf v2.0 425
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAM13067.1| unknown protein [Arabidopsis thaliana] gb|AAM91174.1| unknown protein [Arabidopsis thaliana] gb|AED91220.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 0.0
Blast2go: leucine rich repeat-like protein 0.0
unknown
uagpf_v2_unigene27812 uagpf v2.0 380
AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
uagpf_v2_unigene28983 uagpf v2.0 368
AutoFact: ubiquitin family protein [Arabidopsis thaliana] gb|AAM98085.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AAP21172.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AED94781.1| ubiquitin family protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: large proline-rich protein bat3 5.34405e-32
Internal
uagpf_v2_unigene29903 uagpf v2.0 431
AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO 0.0
Blast2go: phosphoinositide 4-kinase gamma 4 0.0
unknown
uagpf_v2_unigene30437 uagpf v2.0 303
AutoFact: initiator-binding protein [Zea mays] 0.0
FL-Next: Isoform 4 of Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1 0.0
Putative C-terminus
uagpf_v2_unigene30598 uagpf v2.0 452
AutoFact: ubiquitin family protein [Arabidopsis thaliana] emb|CAB45783.1| putative protein [Arabidopsis thaliana] emb|CAB80909.1| putative protein [Arabidopsis thaliana] gb|AAL14410.1| AT4g01000/F3I3_20 [Arabidopsis thaliana] gb|AAU90069.1| At4g01000 [Arabidopsis t 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin family protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain