Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ribosomal protein S12/S23

Term: IPR006032  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene9245 uagpf v2.0 421
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: sp=Auxin response factor 17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
uagpf_v2_unigene9327 uagpf v2.0 273
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene9400 uagpf v2.0 704
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SC17_RICCO 0.0
FL-Next: tr=Lipid binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus
uagpf_v2_unigene9737 uagpf v2.0 459
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 5.0498e-22
N-terminus
uagpf_v2_unigene9797 uagpf v2.0 588
AutoFact: protein kinase protein with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana] dbj|BAB01918.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75399.1| protein kinase protein with adenine nucleotide alpha hydrol 0.0
Blast2go: atp binding 0.0
unknown
uagpf_v2_unigene10982 uagpf v2.0 485
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 3.12366e-36
N-terminus
uagpf_v2_unigene11938 uagpf v2.0 1036
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
uagpf_v2_unigene12548 uagpf v2.0 859
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 9.0e-26
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Blast2go: ap2 erf domain-containing transcription factor 1.67556e-31
C-terminus
uagpf_v2_unigene12691 uagpf v2.0 536
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
Blast2go: auxin response factor 2 0.0
unknown
uagpf_v2_unigene12740 uagpf v2.0 917
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s23 0.0
Complete
uagpf_v2_unigene13715 uagpf v2.0 780
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor erf017 0.0
Complete
uagpf_v2_unigene14467 uagpf v2.0 819
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SC17_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
uagpf_v2_unigene14623 uagpf v2.0 849
AutoFact: DUF1336 domain containing protein 0.0
Blast2go: lipid binding 0.0
unknown
uagpf_v2_unigene14650 uagpf v2.0 320
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S4M0_RICCO 0.0
Blast2go: ap-1 complex subunit gamma-2 0.0
unknown
uagpf_v2_unigene15862 uagpf v2.0 579
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S4M0_RICCO 0.0
FL-Next: sp=AP-1 complex subunit gamma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-1 complex subunit gamma-2 0.0
C-terminus
uagpf_v2_unigene16220 uagpf v2.0 465
AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
Blast2go: dehydration-responsive element binding protein 2 1.38465e-38
unknown
uagpf_v2_unigene17490 uagpf v2.0 860
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene17500 uagpf v2.0 785
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 0.0
FL-Next: Isoform 2 of Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 0.0
Blast2go: auxin response 0.0
Internal
uagpf_v2_unigene17564 uagpf v2.0 626
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: sp=Auxin response factor 6; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
uagpf_v2_unigene17640 uagpf v2.0 484
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain