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Assembly Name: uagpf v2.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene34600 uagpf v2.0 331
AutoFact: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Arabidopsis thaliana] dbj|BAD94510.1| hypothetical protein [Arabidopsis thaliana] gb|AEE29802.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Arabidopsis th 3.0e-35
Blast2go: histidine kinase- dna gyrase b- and hsp90-like atpase family protein 1.84971e-43
unknown
uagpf_v2_unigene35252 uagpf v2.0 244
AutoFact: Ethylene responsive element binding protein 1 n=1 Tax=Gossypium barbadense RepID=A3FMG9_GOSBA 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Internal
uagpf_v2_unigene35266 uagpf v2.0 372
AutoFact: RecName: Full=Cyclin-T1-3; Short=CycT1;3 gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa Japonica Group] gb|EEC67709.1| hypothetical protein OsI_35185 [Oryza sativa Indica Group] 3.0e-13
FL-Next: sp=Cyclin-T1-4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 1.29926e-21
N-terminus
uagpf_v2_unigene35864 uagpf v2.0 105
AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
Blast2go: atp-dependent dna helicase q-like 2 0.0
unknown
uagpf_v2_unigene36121 uagpf v2.0 431
AutoFact: FAP multi-domain protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100784254 1.70422e-38
C-terminus
uagpf_v2_unigene36968 uagpf v2.0 376
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene37782 uagpf v2.0 264
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
Blast2go: tpr domain protein 0.0
unknown
uagpf_v2_unigene38329 uagpf v2.0 304
AutoFact: Ethylene-responsive element binding factor 4 n=1 Tax=Glycine max RepID=B3VHW0_SOYBN 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene response factor 3 1.19202e-17
N-terminus
uagpf_v2_unigene38407 uagpf v2.0 406
AutoFact: allantoinase [Robinia pseudoacacia] 0.0
Blast2go: probable allantoinase 1-like 0.0
unknown
uagpf_v2_unigene38669 uagpf v2.0 356
AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
C-terminus
uagpf_v2_unigene38764 uagpf v2.0 404
AutoFact: FAP multi-domain protein 8.0e-05
Blast2go: uncharacterized protein loc100809777 7.79977e-41
Putative coding
uagpf_v2_unigene38876 uagpf v2.0 504
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9HTT1_POPTR 5.0e-07
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor lep-like 8.59475e-08
N-terminus
uagpf_v2_unigene40193 uagpf v2.0 382
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8RMH0_SELML 1.0e-31
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 1.32109e-36
Internal
uagpf_v2_unigene41343 uagpf v2.0 260
AutoFact: RecName: Full=Cyclin-T1-3; Short=CycT1;3 gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa Japonica Group] gb|EEC67709.1| hypothetical protein OsI_35185 [Oryza sativa Indica Group] 3.0e-13
Blast2go: protein 1.29926e-21
unknown
uagpf_v2_unigene41507 uagpf v2.0 342
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene42401 uagpf v2.0 415
AutoFact: Unassigned protein
Blast2go: tetratricopeptide repeat domain-containing protein 2.8026e-45
unknown
uagpf_v2_unigene42451 uagpf v2.0 257
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 7.0e-28
FL-Next: sp=DNA ligase; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: dna ligase 1.80942e-34
C-terminus
uagpf_v2_unigene43390 uagpf v2.0 265
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase ino80-like 0.0
Internal
uagpf_v2_unigene44315 uagpf v2.0 329
AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9RFH2_RICCO 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 0.0
Internal
uagpf_v2_unigene46989 uagpf v2.0 350
AutoFact: Frizzy panicle n=11 Tax=Oryza RepID=Q8H3Q1_ORYSJ 3.0e-25
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: frizzy panicle 7.99397e-32
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain