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Assembly Name: uagpf v2.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19068 uagpf v2.0 836
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr domain protein 0.0
C-terminus
uagpf_v2_unigene25062 uagpf v2.0 540
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9NBC4_POPTR 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 3.38839e-24
Putative C-terminus
uagpf_v2_unigene26414 uagpf v2.0 354
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
unknown
uagpf_v2_unigene27123 uagpf v2.0 277
AutoFact: allantoinase [Robinia pseudoacacia] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: probable allantoinase 1-like 0.0
C-terminus
uagpf_v2_unigene27156 uagpf v2.0 519
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Internal
uagpf_v2_unigene27233 uagpf v2.0 436
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
N-terminus
uagpf_v2_unigene27265 uagpf v2.0 410
AutoFact: PsbP domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene27317 uagpf v2.0 344
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
N-terminus
uagpf_v2_unigene27521 uagpf v2.0 643
AutoFact: AP2 domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene28241 uagpf v2.0 378
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene29834 uagpf v2.0 427
AutoFact: WS0273.BR_I01 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0273_I01 3, mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene30524 uagpf v2.0 464
AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 1.6707e-15
N-terminus
uagpf_v2_unigene30633 uagpf v2.0 278
AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKM9_9ASPA 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene response factor 4.81639e-34
Internal
uagpf_v2_unigene30830 uagpf v2.0 680
AutoFact: putative AP2-related transcription factor [Oryza sativa] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 2 1.62046e-41
C-terminus
uagpf_v2_unigene31158 uagpf v2.0 206
AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
Blast2go: atp-dependent dna helicase q-like 2 0.0
Coding
uagpf_v2_unigene31627 uagpf v2.0 451
AutoFact: AP2-related transcription factor n=1 Tax=Mesembryanthemum crystallinum RepID=Q9M4Y9_MESCR 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 1.43459e-37
Internal
uagpf_v2_unigene32120 uagpf v2.0 784
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
unknown
uagpf_v2_unigene32136 uagpf v2.0 648
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene32765 uagpf v2.0 372
AutoFact: putative AP2-related transcription factor [Oryza sativa] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 2 1.62046e-41
Internal
uagpf_v2_unigene34039 uagpf v2.0 343
AutoFact: ERF transcription factor n=1 Tax=Solanum tuberosum RepID=A4ZX83_SOLTU 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain