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Assembly Name: uagpf v2.0

Name: Chromo domain/shadow

Term: IPR000953  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30283 uagpf v2.0 503
AutoFact: RecName: Full=Nitrate reductase [NADH]; Short=NR gb|AAA33114.1| nitrate reductase [Cucurbita maxima] 0.0
FL-Next: sp=Nitrate reductase [NADH]; Cichorium intybus (Chicory). 0.0
Blast2go: nitrate reductase 0.0
Internal
uagpf_v2_unigene30651 uagpf v2.0 285
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RAZ9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
uagpf_v2_unigene30693 uagpf v2.0 447
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Putative C-terminus
uagpf_v2_unigene30882 uagpf v2.0 322
AutoFact: protein kinase family protein [Musa acuminata] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.87354e-30
Internal
uagpf_v2_unigene31712 uagpf v2.0 426
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTS9_ELAGV 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Zea mays (Maize). 0.0
Blast2go: DNA (cytosine-5)-methyltransferase 0.0
Internal
uagpf_v2_unigene32136 uagpf v2.0 648
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene32212 uagpf v2.0 424
AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 0.0
Putative Complete
uagpf_v2_unigene32278 uagpf v2.0 394
AutoFact: Receptor serine/threonine kinase, putative n=1 Tax=Ricinus communis RepID=B9RIJ3_RICCO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at5g39020-like 1.99e-36
Internal
uagpf_v2_unigene33110 uagpf v2.0 353
AutoFact: Putative polyprotein n=1 Tax=Solanum habrochaites RepID=B3TPP6_SOLHA 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac079131_10 copia-type 3.62119e-28
Putative N-terminus
uagpf_v2_unigene34084 uagpf v2.0 303
AutoFact: adenine nucleotide alpha hydrolases-domain containing protein kinase [Arabidopsis thaliana] gb|AEE35957.1| adenine nucleotide alpha hydrolases-domain containing protein kinase [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene34106 uagpf v2.0 263
AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Panicum virgatum RepID=A4GMN4_9POAL 4.0e-13
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 7.54011e-17
Putative C-terminus
uagpf_v2_unigene34200 uagpf v2.0 420
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene34505 uagpf v2.0 312
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Internal
uagpf_v2_unigene34569 uagpf v2.0 286
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2RB45_ORYSJ 3.0e-20
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.09859e-23
Internal
uagpf_v2_unigene34675 uagpf v2.0 300
AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon protein 8.54214e-22
Internal
uagpf_v2_unigene34686 uagpf v2.0 224
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
C-terminus
uagpf_v2_unigene34737 uagpf v2.0 393
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 3.01564e-32
Complete
uagpf_v2_unigene34875 uagpf v2.0 268
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pol protein 8.61406e-21
Internal
uagpf_v2_unigene34941 uagpf v2.0 393
AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 4.0e-35
FL-Next: tr=Pol protein; Cucumis melo subsp. melo. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.68007e-40
Internal
uagpf_v2_unigene35423 uagpf v2.0 230
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: integrase 1.36968e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain