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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene13293 uagpf v2.0 665
• AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 1.99965e-42
• Blast2go: ubiquitin-protein pub12 0.0
Coding
uagpf_v2_unigene13315 uagpf v2.0 648
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
• Blast2go: protein phosphatase 0.0
unknown
uagpf_v2_unigene13708 uagpf v2.0 306
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: amp dependent 0.0
C-terminus
uagpf_v2_unigene13723 uagpf v2.0 1172
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: expansin 0.0
Complete
uagpf_v2_unigene13750 uagpf v2.0 455
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SQF9_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene13890 uagpf v2.0 425
• AutoFact: PREDICTED: similar to oligopeptide transporter, putative n=1 Tax=Vitis vinifera RepID=UPI0001985618 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proton-dependent oligopeptide transport family protein 0.0
Internal
uagpf_v2_unigene14026 uagpf v2.0 1453
• AutoFact: Alpha-expansin 11, putative n=1 Tax=Ricinus communis RepID=B9R8E5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha-expansin 11 0.0
Complete
uagpf_v2_unigene14134 uagpf v2.0 813
• AutoFact: Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana] dbj|BAC42465.1| unknown protein [Arabidopsis thaliana] gb|AAO63399.1| At4g15450 [Arabidopsis thaliana] gb|AEE83605.1| Senescence/dehydration-associated protein-like protein [Ara 3.0e-13
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene14249 uagpf v2.0 816
• AutoFact: U-box multi-domain protein 3.0e-17
• FL-Next: sp=U-box domain-containing protein 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene14399 uagpf v2.0 1787
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 14 0.0
C-terminus
uagpf_v2_unigene14702 uagpf v2.0 400
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
• Blast2go: dead-box atp-dependent rna helicase 13 0.0
unknown
uagpf_v2_unigene14886 uagpf v2.0 410
• AutoFact: Beta-carotene hydroxylase n=3 Tax=Arabidopsis RepID=Q9SZZ8_ARATH 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-carotene hydroxylase 2.84571e-31
C-terminus
uagpf_v2_unigene15039 uagpf v2.0 384
• AutoFact: U-box multi-domain protein 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene15040 uagpf v2.0 1726
• AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: ccr4-not transcription complex subunit 0.0
C-terminus
uagpf_v2_unigene15261 uagpf v2.0 577
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene15473 uagpf v2.0 1023
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene15477 uagpf v2.0 512
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
uagpf_v2_unigene15549 uagpf v2.0 1048
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: opc-8:0 ligase1 0.0
N-terminus
uagpf_v2_unigene15667 uagpf v2.0 1828
• AutoFact: putative alanine aminotransferase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alanine aminotransferase 0.0
Complete
uagpf_v2_unigene15813 uagpf v2.0 849
• AutoFact: UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp|Q9SJL0.1|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb|AAD31582.1| putative glucosyltransferase [Arabidopsis thaliana] gb|AAL06924.1| At2g36970/T1J8.15 [Arabidopsis thaliana] gb|AA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: udp-glycosyltransferase-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain