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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene7268 uagpf v2.0 633
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene7356 uagpf v2.0 400
• AutoFact: Ubiquitin-protein ligase, PUB12 n=2 Tax=Selaginella moellendorffii RepID=D8R4N0_SELML 1.4013e-45
• Blast2go: arm protein 0.0
unknown
uagpf_v2_unigene7814 uagpf v2.0 445
• AutoFact: TPA_exp: E3 ubiquitin ligase [Medicago truncatula] 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.99596e-35
Internal
uagpf_v2_unigene8007 uagpf v2.0 582
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acyl:coa ligase 0.0
Putative N-terminus
uagpf_v2_unigene8264 uagpf v2.0 335
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-13
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: rcc1 and btb domain-containing protein 0.0
Internal
uagpf_v2_unigene8268 uagpf v2.0 250
• AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pattern formation protein emb30-like 0.0
Internal
uagpf_v2_unigene8592 uagpf v2.0 738
• AutoFact: FOG: RCC1 domain (ISS) [Ostreococcus tauri] emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulator of chromosome condensation repeat-containing protein 0.0
Putative Complete
uagpf_v2_unigene8655 uagpf v2.0 381
• AutoFact: UV-damaged DNA binding factor - like protein [Arabidopsis thaliana] 1.0e-14
• FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna damage-binding protein 1a 1.73909e-17
Internal
uagpf_v2_unigene8667 uagpf v2.0 1526
• AutoFact: U-box domain-containing protein 14 [Arabidopsis thaliana] sp|Q8VZ40.1|PUB14_ARATH RecName: Full=U-box domain-containing protein 14; AltName: Full=E3 ubiquitin-protein ligase PUB14; AltName: Full=Plant U-box protein 14; AltName: Full=Prototypical U-box dom 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8729 uagpf v2.0 476
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acyl:coa ligase 0.0
C-terminus
uagpf_v2_unigene8753 uagpf v2.0 559
• AutoFact: exostosin-like protein [Arabidopsis thaliana] gb|ABI93883.1| At1g67410 [Arabidopsis thaliana] gb|AEE34641.1| exostosin-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arabinosyltransferase-like protein 0.0
C-terminus
uagpf_v2_unigene9178 uagpf v2.0 666
• AutoFact: Unassigned protein
• Blast2go: predicted protein [Physcomitrella patens subsp. patens] 0.0
unknown
uagpf_v2_unigene9374 uagpf v2.0 1132
• AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
C-terminus
uagpf_v2_unigene9797 uagpf v2.0 588
• AutoFact: protein kinase protein with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana] dbj|BAB01918.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75399.1| protein kinase protein with adenine nucleotide alpha hydrol 0.0
• Blast2go: atp binding 0.0
unknown
uagpf_v2_unigene9881 uagpf v2.0 633
• AutoFact: Polygalacturonase n=1 Tax=Cucumis melo RepID=O81245_CUCME 4.0e-08
• FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
• Blast2go: endo-polygalacturonase 5.16914e-09
Putative C-terminus
uagpf_v2_unigene9980 uagpf v2.0 353
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lateral signaling target protein 0.0
Internal
uagpf_v2_unigene10190 uagpf v2.0 378
• AutoFact: KAP multi-domain protein 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 4-like 0.0
Internal
uagpf_v2_unigene10614 uagpf v2.0 311
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-13
• Blast2go: rcc1 and btb domain-containing protein 0.0
unknown
uagpf_v2_unigene10847 uagpf v2.0 432
• AutoFact: exostosin-like protein [Arabidopsis thaliana] gb|ABI93883.1| At1g67410 [Arabidopsis thaliana] gb|AEE34641.1| exostosin-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arabinosyltransferase-like protein 0.0
Internal
uagpf_v2_unigene10998 uagpf v2.0 443
• AutoFact: DUF868 domain containing protein 0.0
• Blast2go: uncharacterized protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain