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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4818 uagpf v2.0 1205
AutoFact: Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana] dbj|BAC42465.1| unknown protein [Arabidopsis thaliana] gb|AAO63399.1| At4g15450 [Arabidopsis thaliana] gb|AEE83605.1| Senescence/dehydration-associated protein-like protein [Ara 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene4852 uagpf v2.0 521
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FII1.1|FK118_ARATH RecName: Full=F-box/kelch-repeat protein At5g42360 gb|AAK56271.1|AF367282_1 AT5g42360/MDH9_5 [Arabidopsis thaliana] dbj|BAB10477.1| unnamed protein product [Arabidopsis thaliana] gb 5.0e-25
FL-Next: sp=F-box/kelch-repeat protein At5g42360; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box kelch-repeat protein 8.28518e-41
C-terminus
uagpf_v2_unigene4953 uagpf v2.0 704
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
uagpf_v2_unigene4967 uagpf v2.0 816
AutoFact: protein limit dextrinase [Arabidopsis thaliana] sp|Q8GTR4.2|PULA1_ARATH RecName: Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName: Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags: Precursor gb|AED90732.1| protein limit dextrinase [Arabidopsis tha 0.0
FL-Next: sp=NAD(P)H-quinone oxidoreductase subunit J, chloroplastic 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Blast2go: pullulanase chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene4994 uagpf v2.0 640
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
C-terminus
uagpf_v2_unigene5152 uagpf v2.0 786
AutoFact: Protein RCC2, putative n=1 Tax=Ricinus communis RepID=B9R853_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of chromosome condensation family protein 0.0
Putative N-terminus
uagpf_v2_unigene5649 uagpf v2.0 723
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
C-terminus
uagpf_v2_unigene5983 uagpf v2.0 661
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
Blast2go: abc transporter family protein 0.0
unknown
uagpf_v2_unigene6089 uagpf v2.0 562
AutoFact: 4-coumarate:coenzyme A ligase 1 n=4 Tax=Funariaceae RepID=B7SB99_PHYPA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
uagpf_v2_unigene6274 uagpf v2.0 572
AutoFact: Expansin n=1 Tax=Vicia faba RepID=A2IBX3_VICFA 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: expansin 7.80759e-38
C-terminus
uagpf_v2_unigene6563 uagpf v2.0 832
AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R706_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6646 uagpf v2.0 794
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulator of chromosome expressed 0.0
N-terminus
uagpf_v2_unigene6653 uagpf v2.0 1121
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
uagpf_v2_unigene6755 uagpf v2.0 603
AutoFact: BRASSINAZOLE-RESISTANT 2 protein, putative 1.0e-30
Blast2go: protein 1.17983e-31
Coding
uagpf_v2_unigene6765 uagpf v2.0 841
AutoFact: protein kinase MSK-3-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase epsilon 0.0
N-terminus
uagpf_v2_unigene6855 uagpf v2.0 530
AutoFact: U-box multi-domain protein 3.0e-20
Blast2go: protein 0.0
unknown
uagpf_v2_unigene6916 uagpf v2.0 461
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB02454.1| unnamed protein product [Arabidopsis thaliana] gb|AAU94380.1| At3g19300 [Arabidopsis thaliana] gb|AAV59270.1| At3g19300 [Arabidopsis thaliana] gb|AEE76221.1| protein kinase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g49730-like 0.0
Putative C-terminus
uagpf_v2_unigene6990 uagpf v2.0 593
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T7M5_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd repeat-containing protein 44-like 0.0
C-terminus
uagpf_v2_unigene7253 uagpf v2.0 792
AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl:coa ligase 0.0
C-terminus
uagpf_v2_unigene7263 uagpf v2.0 636
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb07g028660; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: elongator protein 2 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain