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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2303 uagpf v2.0 623
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
Blast2go: protein phosphatase 0.0
unknown
uagpf_v2_unigene2337 uagpf v2.0 464
AutoFact: Protein RCC2, putative n=1 Tax=Ricinus communis RepID=B9R853_RICCO 0.0
Blast2go: regulator of chromosome condensation family protein 0.0
Coding
uagpf_v2_unigene2392 uagpf v2.0 1483
AutoFact: polygalacturonase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
uagpf_v2_unigene2632 uagpf v2.0 1530
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2662 uagpf v2.0 446
AutoFact: Unassigned protein
Blast2go: wd repeat-containing 0.0
unknown
uagpf_v2_unigene2730 uagpf v2.0 688
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
C-terminus
uagpf_v2_unigene3091 uagpf v2.0 1064
AutoFact: DNA-binding WRKY domain-containing protein [Musa acuminata] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 28-like 1.96182e-44
Putative C-terminus
uagpf_v2_unigene3122 uagpf v2.0 556
AutoFact: Ank_2 multi-domain protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ankyrin repeat and regulator of chromosome condensation domain-containing protein 0.0
C-terminus
uagpf_v2_unigene3129 uagpf v2.0 902
AutoFact: U-box multi-domain protein 3.0e-20
FL-Next: sp=U-box domain-containing protein 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene3351 uagpf v2.0 690
AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
C-terminus
uagpf_v2_unigene3383 uagpf v2.0 1227
AutoFact: proteasome assembly chaperone 2 [Arabidopsis thaliana] dbj|BAB01690.1| unnamed protein product [Arabidopsis thaliana] gb|ABD59042.1| At3g18940 [Arabidopsis thaliana] gb|AEE76171.1| proteasome assembly chaperone 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: proteasome assembly chaperone 2 0.0
Complete
uagpf_v2_unigene3522 uagpf v2.0 910
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SF10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 12 0.0
Putative N-terminus
uagpf_v2_unigene3727 uagpf v2.0 996
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene3823 uagpf v2.0 969
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene3996 uagpf v2.0 1085
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Putative C-terminus
uagpf_v2_unigene4226 uagpf v2.0 611
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: regulator of chromosome condensation repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene4232 uagpf v2.0 516
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAC09037.1| putative protein kinase [Arabidopsis thaliana] gb|AAT99800.1| At2g18890 [Arabidopsis thaliana] gb|AAU94416.1| At2g18890 [Arabidopsis thaliana] gb|AEC06821.1| protein kinase-like protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like serine threonine-protein kinase at5g57670-like 0.0
Internal
uagpf_v2_unigene4499 uagpf v2.0 893
AutoFact: diacylglycerol kinase-like protein [Arabidopsis thaliana] gb|AAC62895.1| expressed protein [Arabidopsis thaliana] gb|AEC10642.1| diacylglycerol kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: diacylglycerol kinase-like 0.0
C-terminus
uagpf_v2_unigene4546 uagpf v2.0 566
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
uagpf_v2_unigene4572 uagpf v2.0 1322
AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
FL-Next: tr=mRNA, clone: RTFL01-03-G21; Thellungiella halophila (Salt cress). 0.0
Blast2go: ureidoglycine aminohydrolase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain