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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40161 uagpf v2.0 436
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 9.0e-31
Blast2go: regulator of chromosome condensation-like protein with fyve zinc finger domain 3.24624e-32
unknown
uagpf_v2_unigene40399 uagpf v2.0 343
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FII1.1|FK118_ARATH RecName: Full=F-box/kelch-repeat protein At5g42360 gb|AAK56271.1|AF367282_1 AT5g42360/MDH9_5 [Arabidopsis thaliana] dbj|BAB10477.1| unnamed protein product [Arabidopsis thaliana] gb 3.0e-25
FL-Next: sp=F-box/kelch-repeat protein At5g42360; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box kelch-repeat protein 6.29616e-38
Internal
uagpf_v2_unigene40600 uagpf v2.0 293
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Coding
uagpf_v2_unigene40779 uagpf v2.0 354
AutoFact: SET domain-containing protein [Arabidopsis thaliana] gb|AAY25446.1| At1g01920 [Arabidopsis thaliana] gb|AEE27354.1| SET domain-containing protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: set domain-containing protein 1.97536e-30
Internal
uagpf_v2_unigene40868 uagpf v2.0 477
AutoFact: BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1] gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase herc2-like 1.43017e-41
Internal
uagpf_v2_unigene40871 uagpf v2.0 319
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of chromosome condensation repeat-containing protein 0.0
Internal
uagpf_v2_unigene41245 uagpf v2.0 295
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
uagpf_v2_unigene41417 uagpf v2.0 422
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
N-terminus
uagpf_v2_unigene41468 uagpf v2.0 280
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 4.6929e-13
Internal
uagpf_v2_unigene41599 uagpf v2.0 400
AutoFact: DUF1517 domain containing protein 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene42187 uagpf v2.0 205
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
uagpf_v2_unigene42297 uagpf v2.0 418
AutoFact: DNA-binding protein WRKY2-like n=2 Tax=Oryza sativa RepID=Q9FE35_ORYSJ 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
C-terminus
uagpf_v2_unigene42408 uagpf v2.0 315
AutoFact: Ank_2 multi-domain protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin repeat and regulator of chromosome condensation domain-containing protein 0.0
Internal
uagpf_v2_unigene42542 uagpf v2.0 255
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Internal
uagpf_v2_unigene42594 uagpf v2.0 237
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 9.0e-31
Blast2go: regulator of chromosome condensation-like protein with fyve zinc finger domain 3.24624e-32
unknown
uagpf_v2_unigene42872 uagpf v2.0 269
AutoFact: Ank_2 multi-domain protein 2.0e-13
FL-Next: tr=Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: ankyrin repeat and regulator of chromosome condensation domain-containing protein 0.0
Internal
uagpf_v2_unigene42932 uagpf v2.0 348
AutoFact: RCC1 domain containing protein 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zr1 protein 4.99123e-16
Internal
uagpf_v2_unigene43458 uagpf v2.0 436
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g004680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
Internal
uagpf_v2_unigene43500 uagpf v2.0 296
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mate efflux family protein dtx1-like 5.95164e-38
Internal
uagpf_v2_unigene43504 uagpf v2.0 283
AutoFact: protein kinase protein with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana] dbj|BAB01918.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75399.1| protein kinase protein with adenine nucleotide alpha hydrol 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain