Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36910 uagpf v2.0 320
AutoFact: Secondary cell wall-related glycosyltransferase family 47 n=1 Tax=Zea mays RepID=B6U626_MAIZE 1.0e-38
Blast2go: secondary cell wall-related glycosyltransferase family expressed 0.0
unknown
uagpf_v2_unigene36979 uagpf v2.0 459
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 13 0.0
Putative Complete
uagpf_v2_unigene37345 uagpf v2.0 512
AutoFact: proteasome assembly chaperone 2 [Arabidopsis thaliana] dbj|BAB01690.1| unnamed protein product [Arabidopsis thaliana] gb|ABD59042.1| At3g18940 [Arabidopsis thaliana] gb|AEE76171.1| proteasome assembly chaperone 2 [Arabidopsis thaliana] 0.0
Blast2go: proteasome assembly chaperone 2 0.0
Putative coding
uagpf_v2_unigene37790 uagpf v2.0 571
AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37932 uagpf v2.0 423
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
Blast2go: mate efflux family protein dtx1-like 0.0
unknown
uagpf_v2_unigene38177 uagpf v2.0 412
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Os08g0493900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: elongator protein 2 0.0
Internal
uagpf_v2_unigene38342 uagpf v2.0 284
AutoFact: Secondary cell wall-related glycosyltransferase family 47 n=1 Tax=Populus tremula x Populus tremuloides RepID=Q5BM99_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arabinosyltransferase-like protein 0.0
Internal
uagpf_v2_unigene38442 uagpf v2.0 348
AutoFact: RCC1 domain containing protein 5.0e-11
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 4.83184e-15
Putative coding
uagpf_v2_unigene38460 uagpf v2.0 336
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene38468 uagpf v2.0 467
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
uagpf_v2_unigene38826 uagpf v2.0 411
AutoFact: Cell wall protein Exp4 n=1 Tax=Mirabilis jalapa RepID=Q84L38_MIRJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-expansin 8 0.0
Putative N-terminus
uagpf_v2_unigene38898 uagpf v2.0 180
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38912 uagpf v2.0 345
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Internal
uagpf_v2_unigene38938 uagpf v2.0 376
AutoFact: Oligopeptide transporter, putative n=1 Tax=Ricinus communis RepID=B9S740_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptide transporter ptr3-a 0.0
C-terminus
uagpf_v2_unigene39158 uagpf v2.0 333
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rcc1 and btb domain-containing protein 5.12734e-17
Internal
uagpf_v2_unigene39416 uagpf v2.0 285
AutoFact: DUF3638 domain containing protein 4.0e-14
FL-Next: tr=Predicted protein; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: hypothetical protein CHLREDRAFT_151640 [Chlamydomonas reinhardtii] 1.73574e-13
Internal
uagpf_v2_unigene39428 uagpf v2.0 351
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FII1.1|FK118_ARATH RecName: Full=F-box/kelch-repeat protein At5g42360 gb|AAK56271.1|AF367282_1 AT5g42360/MDH9_5 [Arabidopsis thaliana] dbj|BAB10477.1| unnamed protein product [Arabidopsis thaliana] gb 5.0e-25
FL-Next: sp=F-box/kelch-repeat protein At5g42360; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box kelch-repeat protein 8.28518e-41
Internal
uagpf_v2_unigene39603 uagpf v2.0 446
AutoFact: Kinesin, motor region [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
uagpf_v2_unigene39671 uagpf v2.0 447
AutoFact: Ubiquitin-protein ligase, PUB12 n=2 Tax=Selaginella moellendorffii RepID=D8R4N0_SELML 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arm protein 0.0
Putative C-terminus
uagpf_v2_unigene39883 uagpf v2.0 362
AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain