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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30220 uagpf v2.0 511
AutoFact: U-box domain-containing protein 12 n=4 Tax=Arabidopsis RepID=PUB12_ARATH 1.0e-23
Blast2go: at3g46510-like protein 1.20073e-27
Coding
uagpf_v2_unigene30357 uagpf v2.0 567
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene30526 uagpf v2.0 302
AutoFact: pullulanase-like protein (starch debranching enzyme) [Arabidopsis thaliana] 0.0
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pullulanase chloroplastic-like 0.0
Internal
uagpf_v2_unigene30577 uagpf v2.0 362
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
unknown
uagpf_v2_unigene30698 uagpf v2.0 382
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene30768 uagpf v2.0 446
AutoFact: armadillo repeat only 1 protein [Arabidopsis thaliana] emb|CAB45455.1| putative protein [Arabidopsis thaliana] emb|CAB80211.1| putative protein [Arabidopsis thaliana] gb|AEE86439.1| armadillo repeat only 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=ARO1-like protein 2; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene30779 uagpf v2.0 322
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Internal
uagpf_v2_unigene30817 uagpf v2.0 565
AutoFact: Alpha-expansin n=2 Tax=Papilionoideae RepID=Q9FNT1_CICAR 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-expansin 5 8.08549e-43
N-terminus
uagpf_v2_unigene30883 uagpf v2.0 337
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
Blast2go: dna damage-binding protein 1a 0.0
unknown
uagpf_v2_unigene31022 uagpf v2.0 510
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
C-terminus
uagpf_v2_unigene31076 uagpf v2.0 349
AutoFact: UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein F27K19_220; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: udp-glucose pyrophosphorylase 3 0.0
C-terminus
uagpf_v2_unigene31351 uagpf v2.0 339
AutoFact: KAP multi-domain protein 6.0e-08
Blast2go: u-box domain-containing protein 4-like 0.0
Putative coding
uagpf_v2_unigene31415 uagpf v2.0 745
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene31464 uagpf v2.0 389
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SNB4_RICCO 6.0e-28
Blast2go: protein phosphatase 2c-like protein 1.50142e-30
unknown
uagpf_v2_unigene31465 uagpf v2.0 835
AutoFact: exostosin-like protein [Arabidopsis thaliana] gb|ABI93883.1| At1g67410 [Arabidopsis thaliana] gb|AEE34641.1| exostosin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arabinosyltransferase-like protein 0.0
C-terminus
uagpf_v2_unigene31785 uagpf v2.0 509
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9SI77_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase suvr3 0.0
Putative C-terminus
uagpf_v2_unigene31848 uagpf v2.0 275
AutoFact: putative receptor protein kinase CRINKLY4 precursor [Zea mays] sp|O24585.1|CRI4_MAIZE RecName: Full=Putative receptor protein kinase CRINKLY4; Flags: Precursor gb|AAB09771.1| CRINKLY4 precursor [Zea mays] 3.00004e-41
FL-Next: sp=Putative receptor protein kinase CRINKLY4; Zea mays (Maize). 0.0
Blast2go: serine threonine-protein kinase-like protein acr4 0.0
C-terminus
uagpf_v2_unigene31922 uagpf v2.0 607
AutoFact: ARO1-like protein (Fragment) n=1 Tax=Pinus taeda RepID=B7FF15_PINTA 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: tpa_inf: aro1-like protein 1 0.0
C-terminus
uagpf_v2_unigene31959 uagpf v2.0 728
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 13 0.0
C-terminus
uagpf_v2_unigene32002 uagpf v2.0 293
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain