Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Cyclic nucleotide-binding, conserved site

Term: IPR018488  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1188 uagpf v2.0 1323
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cationic amino acid transporter 0.0
Putative N-terminus
uagpf_v2_unigene1538 uagpf v2.0 549
AutoFact: putative cyclic nucleotide-regulated ion channel protein [Arabidopsis thaliana] 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
unknown
uagpf_v2_unigene1565 uagpf v2.0 888
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] emb|CAB40130.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] dbj|BAB08864.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] gb|AED96975. 0.0
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
Internal
uagpf_v2_unigene1622 uagpf v2.0 489
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9SJA4.2|CNG14_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 14; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 14 dbj|BAF00079.1| putative cyclic nucleoti 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
Putative coding
uagpf_v2_unigene2674 uagpf v2.0 1241
AutoFact: palmitoyl-CoA hydrolase [Arabidopsis thaliana] gb|AEE27325.1| palmitoyl-CoA hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-coenzyme a thioesterase 8-like 0.0
C-terminus
uagpf_v2_unigene3043 uagpf v2.0 357
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
Blast2go: cyclic nucleotide gated channel 0.0
unknown
uagpf_v2_unigene3208 uagpf v2.0 783
AutoFact: Putative multidrug resistance-associated protein 7 n=2 Tax=Oryza sativa Japonica Group RepID=Q5SMN1_ORYSJ 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 13-like 1.19859e-37
Putative Complete
uagpf_v2_unigene3866 uagpf v2.0 623
AutoFact: palmitoyl-CoA hydrolase [Arabidopsis thaliana] gb|AEE27325.1| palmitoyl-CoA hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-coenzyme a thioesterase 8-like 0.0
N-terminus
uagpf_v2_unigene6007 uagpf v2.0 1329
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9STR6_RICCO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
C-terminus
uagpf_v2_unigene6160 uagpf v2.0 872
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: cationic amino acid transporter 0.0
C-terminus
uagpf_v2_unigene8449 uagpf v2.0 376
AutoFact: Pinoresinol-lariciresinol reductase n=1 Tax=Thuja plicata RepID=Q9LD14_THUPL 0.0
FL-Next: tr=Pinoresinol-lariciresinol reductase; Thuja plicata (Western red-cedar) (Giant arborvitae). 0.0
Blast2go: isoflavone reductase homolog 0.0
Internal
uagpf_v2_unigene10017 uagpf v2.0 434
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
uagpf_v2_unigene10447 uagpf v2.0 400
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GRC2_POPTR 0.0
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal
uagpf_v2_unigene11672 uagpf v2.0 393
AutoFact: Phenylcoumaran benzylic ether reductase homolog TH6 n=4 Tax=Pinaceae RepID=Q9M523_TSUHE 0.0
FL-Next: tr=Phenylcoumaran benzylic ether reductase homolog TP5; Tsuga heterophylla (Western hemlock) (Abies heterophylla). 0.0
Blast2go: isoflavone reductase-like protein 0.0
C-terminus
uagpf_v2_unigene12238 uagpf v2.0 748
AutoFact: ABC transporter C family member 5 n=4 Tax=Arabidopsis RepID=AB5C_ARATH 0.0
Blast2go: abc transporter c family member 5-like 0.0
unknown
uagpf_v2_unigene17922 uagpf v2.0 562
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene18955 uagpf v2.0 672
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 2 0.0
C-terminus
uagpf_v2_unigene19566 uagpf v2.0 2062
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene25520 uagpf v2.0 481
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 5.0e-24
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 4.17076e-27
C-terminus
uagpf_v2_unigene27103 uagpf v2.0 467
AutoFact: Potassium channel GORK n=1 Tax=Arabidopsis thaliana RepID=GORK_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel skor 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain