Sustainpine_db
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Assembly Name: uagpf v2.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40162 uagpf v2.0 436
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: Isoform 2 of Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene40245 uagpf v2.0 382
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
uagpf_v2_unigene40621 uagpf v2.0 351
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate- ligase 0.0
Internal
uagpf_v2_unigene40797 uagpf v2.0 385
AutoFact: LRR receptor-like serine/threonine-protein kinase EFR [Arabidopsis thaliana] sp|C0LGT6.1|EFR_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR; AltName: Full=Elongation factor Tu receptor; Short=EF-Tu receptor; Flags: Precursor gb| 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.85796e-40
N-terminus
uagpf_v2_unigene40801 uagpf v2.0 442
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dioxygenase-like protein 0.0
Internal
uagpf_v2_unigene40992 uagpf v2.0 430
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
uagpf_v2_unigene41271 uagpf v2.0 361
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
Internal
uagpf_v2_unigene41703 uagpf v2.0 298
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
uagpf_v2_unigene42632 uagpf v2.0 381
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Putative coding
uagpf_v2_unigene43069 uagpf v2.0 234
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
Internal
uagpf_v2_unigene43569 uagpf v2.0 386
AutoFact: WS00722.B21_A05 WS-PS-N-A-8 Picea glauca cDNA clone WS00722_A05 3', mRNA sequence. 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene44091 uagpf v2.0 313
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] sp|Q9LVP0.1|Y5639_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g63930; Flags: Precursor dbj|BAA96896.1| receptor-like protein kinase [Arabidopsis th 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase gso2-like 2.9079e-18
Internal
uagpf_v2_unigene44569 uagpf v2.0 348
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
C-terminus
uagpf_v2_unigene45001 uagpf v2.0 379
AutoFact: Unassigned protein
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ddb1- and cul4-associated factor homolog 1-like 5.50638e-28
Internal
uagpf_v2_unigene45464 uagpf v2.0 386
AutoFact: Leucine Rich Repeat family protein [Solanum demissum] 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase gso1-like 0.0
Internal
uagpf_v2_unigene45516 uagpf v2.0 425
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene45865 uagpf v2.0 362
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene45878 uagpf v2.0 284
AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 0.0
Blast2go: atp-binding cassette transporter 0.0
unknown
uagpf_v2_unigene45967 uagpf v2.0 313
AutoFact: Glycerate oxidase n=1 Tax=Pinus pinaster RepID=F4MKM3_PINPS 0.0
FL-Next: tr=Glycerate oxidase; Pinus pinaster (Maritime pine). 0.0
Blast2go: aldolase-type tim barrel family protein 0.0
C-terminus
uagpf_v2_unigene46075 uagpf v2.0 214
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 3.0e-12
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.27249e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain