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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10845 uagpf v2.0 390
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|ABK28304.1| unknown [Arabidopsis thaliana] gb|AEE81971.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] 3.0e-21
Blast2go: ubiquitin carboxyl-terminal hydrolase-like protein 1.24328e-24
unknown
uagpf_v2_unigene10945 uagpf v2.0 565
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 0.0
Blast2go: flap endonuclease 1a 0.0
unknown
uagpf_v2_unigene10949 uagpf v2.0 497
AutoFact: Pentatricopeptide repeat protein 98 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE3_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
uagpf_v2_unigene11033 uagpf v2.0 539
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8Z2_RICCO 2.0e-37
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74900, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 7.34139e-39
C-terminus
uagpf_v2_unigene11047 uagpf v2.0 505
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S6Q4_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Internal
uagpf_v2_unigene11066 uagpf v2.0 566
AutoFact: DUF1635 domain containing protein 7.0e-24
Blast2go: protein 1.54593e-19
Putative coding
uagpf_v2_unigene11079 uagpf v2.0 616
AutoFact: DNA-damage-inducible protein f, putative n=1 Tax=Ricinus communis RepID=B9SIJ1_RICCO 0.0
FL-Next: sp=MATE efflux family protein 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-inducible protein 0.0
C-terminus
uagpf_v2_unigene11110 uagpf v2.0 1143
AutoFact: Quinone oxidoreductase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LDI4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-alkenal reductase 0.0
C-terminus
uagpf_v2_unigene11152 uagpf v2.0 703
AutoFact: MATE efflux family protein [Arabidopsis thaliana] sp|Q9SYD6.2|MATE1_ARATH RecName: Full=MATE efflux family protein 1; AltName: Full=Aluminum-activated citrate transporter; AltName: Full=FRD-like protein; AltName: Full=MATE citrate transporter; AltName: Fu 0.0
FL-Next: Isoform 2 of MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE 0.0
Blast2go: mate efflux family protein 0.0
C-terminus
uagpf_v2_unigene11165 uagpf v2.0 389
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK25939.1|AF360229_1 unknown protein [Arabidopsis thaliana] dbj|BAB11608.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64088.1| unknown protein [Arabidopsis thaliana] gb|AED97903.1| uncharacteri 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
uagpf_v2_unigene11211 uagpf v2.0 232
AutoFact: Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9R8H8_RICCO 0.0
FL-Next: tr=Alpha-amylase; Malus domestica (Apple) (Pyrus malus). 0.0
Blast2go: alpha-amylase-like 2 0.0
C-terminus
uagpf_v2_unigene11232 uagpf v2.0 1703
AutoFact: beta adaptin-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-adaptin-like protein a 0.0
Putative C-terminus
uagpf_v2_unigene11235 uagpf v2.0 894
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10910, chloroplastic; Flags: Precursor dbj|BAE98748.1| membrane-associated salt-inducible protein isol 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g10910, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene11250 uagpf v2.0 1143
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene11260 uagpf v2.0 743
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh66-like 0.0
Putative C-terminus
uagpf_v2_unigene11297 uagpf v2.0 471
AutoFact: mitochondrial editing factor 22 [Arabidopsis thaliana] sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770 dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AEE75244.1| mitochondrial editing fa 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 1.3841e-31
Internal
uagpf_v2_unigene11339 uagpf v2.0 820
AutoFact: phosphatidylinositol 4-kinase alpha [Arabidopsis thaliana] ref|NP_850960.1| phosphatidylinositol 4-kinase alpha [Arabidopsis thaliana] sp|Q9SXA1.2|P4KA1_ARATH RecName: Full=Phosphatidylinositol 4-kinase alpha; Short=PI4-kinase alpha; Short=PtdIns-4-kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene11376 uagpf v2.0 719
AutoFact: origin recognition complex subunit 4 [Zea mays] gb|AAL10455.1|AF417484_1 origin recognition complex subunit 4 [Zea mays] 1.99965e-42
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: origin recognition complex subunit 4 0.0
C-terminus
uagpf_v2_unigene11430 uagpf v2.0 380
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene11740 uagpf v2.0 391
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain