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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene9831 uagpf v2.0 462
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RMY5_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.10798e-34
Putative C-terminus
uagpf_v2_unigene9861 uagpf v2.0 398
• AutoFact: ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] gb|AEE86931.1| ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene9866 uagpf v2.0 1327
• AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative Complete
uagpf_v2_unigene9987 uagpf v2.0 324
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 6.0e-26
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.79362e-30
Internal
uagpf_v2_unigene9988 uagpf v2.0 359
• AutoFact: Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9S2B5_RICCO 0.0
• FL-Next: tr=Alpha-amylase, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: alpha-amylase-like 3 0.0
Internal
uagpf_v2_unigene10034 uagpf v2.0 488
• AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
• FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: callose synthase 0.0
Internal
uagpf_v2_unigene10048 uagpf v2.0 291
• AutoFact: PPR-repeat protein-like [Oryza sativa Japonica Group] gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.2039e-45
Internal
uagpf_v2_unigene10089 uagpf v2.0 312
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650 gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.04309e-41
Internal
uagpf_v2_unigene10114 uagpf v2.0 371
• AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene10170 uagpf v2.0 544
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene10233 uagpf v2.0 359
• AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene10285 uagpf v2.0 353
• AutoFact: diacylglycerol kinase 3 [Arabidopsis thaliana] gb|AAL57635.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AAM98254.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AEC06799.1| diacylglycerol kinase 3 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: diacylglycerol kinase 0.0
Internal
uagpf_v2_unigene10332 uagpf v2.0 297
• AutoFact: iy83d12.g1 Cycas ovule - normalized (NYBG) Cycas rumphii cDNA 3', mRNA sequence. 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at3g23330-like 6.1958e-19
C-terminus
uagpf_v2_unigene10429 uagpf v2.0 407
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SMD1_RICCO 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.10501e-33
Internal
uagpf_v2_unigene10517 uagpf v2.0 461
• AutoFact: dsRNA-binding protein [Brassica oleracea var. gongylodes] emb|CAD59428.1| dsRNA-binding protein [Brassica oleracea var. gemmifera] 7.00649e-44
• Blast2go: dsrna-binding protein 0.0
Putative coding
uagpf_v2_unigene10525 uagpf v2.0 368
• AutoFact: Integrase n=1 Tax=Silene latifolia RepID=Q8S942_SILLA 3.0e-19
• Blast2go: pentatricopeptide repeat-containing protein 6.36815e-22
unknown
uagpf_v2_unigene10608 uagpf v2.0 285
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene10674 uagpf v2.0 1368
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd40 repeat compass complex protein 0.0
Complete
uagpf_v2_unigene10677 uagpf v2.0 388
• AutoFact: putative pentatricopeptide repeat domain containing protein [Oryza sativa Japonica Group] 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at3g02330-like 7.78069e-33
Putative N-terminus
uagpf_v2_unigene10827 uagpf v2.0 592
• AutoFact: CBL-interacting protein kinase 14 n=2 Tax=Vitis vinifera RepID=C4P7W3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain