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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene8920 uagpf v2.0 902
• AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene9066 uagpf v2.0 295
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.22973e-33
N-terminus
uagpf_v2_unigene9125 uagpf v2.0 762
• AutoFact: NAC domain-containing protein 8 [Arabidopsis thaliana] sp|Q6NQK2.1|NAC8_ARATH RecName: Full=NAC domain-containing protein 8; Short=ANAC008 gb|AAQ62870.1| At1g25580 [Arabidopsis thaliana] dbj|BAD93935.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF0 0.0
• Blast2go: nac domain-containing protein 8-like 0.0
unknown
uagpf_v2_unigene9144 uagpf v2.0 354
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
uagpf_v2_unigene9163 uagpf v2.0 538
• AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
• Blast2go: alpha-amylase isozyme 3d 0.0
unknown
uagpf_v2_unigene9183 uagpf v2.0 388
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene9278 uagpf v2.0 226
• AutoFact: Glycosyl transferase, family 48 [Medicago truncatula] 0.0
• FL-Next: sp=Callose synthase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: callose synthase 3-like 0.0
Internal
uagpf_v2_unigene9377 uagpf v2.0 326
• AutoFact: putative lysophosphatidic acid acyltransferase [Oryza sativa Japonica Group] gb|EAY79072.1| hypothetical protein OsI_34182 [Oryza sativa Indica Group] gb|EAZ16559.1| hypothetical protein OsJ_32032 [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=LPAT1 0.0
• Blast2go: 1-acyl-sn-glycerol-3-phosphate acyltransferase chloroplastic-like 0.0
Internal
uagpf_v2_unigene9385 uagpf v2.0 458
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
uagpf_v2_unigene9406 uagpf v2.0 343
• AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene9425 uagpf v2.0 867
• AutoFact: putative mitotic arrest defective protein 2B [Oryza sativa Japonica Group] gb|EEE55135.1| hypothetical protein OsJ_02922 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitotic spindle assembly checkpoint protein mad2b 0.0
Complete
uagpf_v2_unigene9540 uagpf v2.0 552
• AutoFact: PLAC8 family protein [Arabidopsis thaliana] gb|AAU44540.1| hypothetical protein AT5G05350 [Arabidopsis thaliana] gb|AED90862.1| PLAC8 family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plac8 family protein 0.0
Putative C-terminus
uagpf_v2_unigene9618 uagpf v2.0 747
• AutoFact: E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana] sp|Q4FE45.1|XB33_ARATH RecName: Full=E3 ubiquitin-protein ligase XBAT33; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT33; AltName: Full=Protein XB3 homolog 3 gb|AAZ140 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase XBAT33; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase xbat33-like 0.0
Internal
uagpf_v2_unigene9640 uagpf v2.0 299
• AutoFact: ABA Overly-Sensitive 5 protein [Arabidopsis thaliana] sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g51965, mitochondrial; Flags: Precursor gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolo 2.0e-22
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g51965, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.51372e-26
Internal
uagpf_v2_unigene9643 uagpf v2.0 511
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene9672 uagpf v2.0 416
• AutoFact: UDP-glucuronosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9T3Q8_RICCO 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: udp- 1.2299e-28
N-terminus
uagpf_v2_unigene9757 uagpf v2.0 200
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g80880, mitochondrial; Flags: Precursor gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown f 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.60247e-17
Internal
uagpf_v2_unigene9785 uagpf v2.0 159
• AutoFact: DNA-damage-inducible protein f, putative n=1 Tax=Ricinus communis RepID=B9SIJ1_RICCO 0.0
• Blast2go: mate efflux family protein chloroplastic-like 0.0
unknown
uagpf_v2_unigene9796 uagpf v2.0 599
• AutoFact: S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] gb|AAK93650.1| unknown protein [Arabidopsis thaliana] gb|AAM67530.1| unknown protein [Arabidopsis thaliana] gb|AEE75944.1| S-adenosyl-L-methionine-dependent methyltran 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene9822 uagpf v2.0 372
• AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAF87863.1|AC022520_7 similar to cdc2 protein kinase [Arabidopsis thaliana] gb|AEE32884.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein CRK1-2; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain