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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4167 uagpf v2.0 690
AutoFact: Flavonoid 3-hydroxylase, putative n=1 Tax=Ricinus communis RepID=B9SBG5_RICCO 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flavonoid 3- 0.0
Putative N-terminus
uagpf_v2_unigene4210 uagpf v2.0 1864
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 4 gamma 0.0
Putative Complete
uagpf_v2_unigene4288 uagpf v2.0 855
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carbon catabolite repressor protein 4-like 3 0.0
C-terminus
uagpf_v2_unigene4347 uagpf v2.0 1285
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4491 uagpf v2.0 842
AutoFact: DNA-binding protein [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene4505 uagpf v2.0 596
AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
unknown
uagpf_v2_unigene4546 uagpf v2.0 566
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
uagpf_v2_unigene4754 uagpf v2.0 432
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUY1.2|PP173_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27800, mitochondrial; Flags: Precursor gb|AEC08046.1| pentatricopeptide repeat-containing protein [Ara 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Coding
uagpf_v2_unigene4801 uagpf v2.0 926
AutoFact: COPZ2; Zeta2-COP 5.0e-14
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene4820 uagpf v2.0 887
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 4 gamma 0.0
Complete
uagpf_v2_unigene4822 uagpf v2.0 638
AutoFact: nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q9LH79.1|SWET2_ARATH RecName: Full=Bidirectional sugar transporter SWEET2; Short=AtSWEET2 dbj|BAB02642.1| MtN3-like protein [Arabidopsis thaliana] gb|AAL06889.1| AT3g14770/T21E2_2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein ruptured pollen grain 0.0
C-terminus
uagpf_v2_unigene5023 uagpf v2.0 682
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEE56247.1| hypothetical protein OsJ_05263 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g21880, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene5144 uagpf v2.0 769
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
uagpf_v2_unigene5147 uagpf v2.0 590
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gb|AAO64144.1| unknown protein [Arabidopsi 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g37230; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene5297 uagpf v2.0 785
AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: amp deaminase 0.0
C-terminus
uagpf_v2_unigene5382 uagpf v2.0 1353
AutoFact: GDSL-lipase 1 [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene5400 uagpf v2.0 1320
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene5407 uagpf v2.0 617
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene5769 uagpf v2.0 1139
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
uagpf_v2_unigene5808 uagpf v2.0 423
AutoFact: No apical meristem-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZFA1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: no apical meristem-like protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain