Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene47374 uagpf v2.0 57
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene47384 uagpf v2.0 204
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 4.31025e-13
Internal
uagpf_v2_unigene47391 uagpf v2.0 423
AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
uagpf_v2_unigene47395 uagpf v2.0 162
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g74600-like protein 1.42357e-33
N-terminus
uagpf_v2_unigene47477 uagpf v2.0 391
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SKC9_RICCO 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene47598 uagpf v2.0 426
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uvrb uvrc motif-containing protein 0.0
Internal
uagpf_v2_unigene47793 uagpf v2.0 275
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gb|AAO64144.1| unknown protein [Arabidopsi 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.4013e-45
Internal
uagpf_v2_unigene47810 uagpf v2.0 314
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g64320, mitochondrial; Flags: Precursor dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana] 6.0e-12
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 3.85785e-17
Putative coding
uagpf_v2_unigene47868 uagpf v2.0 315
AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Internal
uagpf_v2_unigene47879 uagpf v2.0 348
AutoFact: CBL-interacting serine/threonine-protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T407_RICCO 0.0
Blast2go: cbl-interacting serine threonine-protein 0.0
unknown
uagpf_v2_unigene47891 uagpf v2.0 182
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.87401e-19
Internal
uagpf_v2_unigene47946 uagpf v2.0 349
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
unknown
uagpf_v2_unigene48042 uagpf v2.0 303
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQJ8_RICCO 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 7.92765e-28
Internal
uagpf_v2_unigene48099 uagpf v2.0 194
AutoFact: DUF1771 multi-domain protein 5.0e-16
Blast2go: protein 0.0
unknown
uagpf_v2_unigene48116 uagpf v2.0 334
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S3P8_RICCO 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.01787e-30
Internal
uagpf_v2_unigene48158 uagpf v2.0 326
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at3g23330-like 1.67505e-17
C-terminus
uagpf_v2_unigene48238 uagpf v2.0 391
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g19720; AltName: Full=Protein DYW7 gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana] gb| 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 1.43212e-35
Internal
uagpf_v2_unigene48361 uagpf v2.0 333
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh6 9.74673e-41
Internal
uagpf_v2_unigene48382 uagpf v2.0 237
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.08086e-16
Internal
uagpf_v2_unigene48643 uagpf v2.0 336
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.66547e-34
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain