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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46370 uagpf v2.0 230
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Coding
uagpf_v2_unigene46377 uagpf v2.0 434
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUY1.2|PP173_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27800, mitochondrial; Flags: Precursor gb|AEC08046.1| pentatricopeptide repeat-containing protein [Ara 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At3g25210, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene46401 uagpf v2.0 291
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.88188e-18
C-terminus
uagpf_v2_unigene46412 uagpf v2.0 150
AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: nhl repeat-containing protein 0.0
unknown
uagpf_v2_unigene46433 uagpf v2.0 392
AutoFact: pfam01535, PPR, PPR repeat 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene46504 uagpf v2.0 309
AutoFact: Tetratricopeptide repeat, putative [Oryza sativa Japonica Group] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 7.8875e-26
Internal
uagpf_v2_unigene46546 uagpf v2.0 345
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Flags: Precursor dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana] 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative coding
uagpf_v2_unigene46565 uagpf v2.0 402
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene46572 uagpf v2.0 333
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.7382e-30
Internal
uagpf_v2_unigene46593 uagpf v2.0 217
AutoFact: 1,3-beta-glucan synthase, putative n=1 Tax=Ricinus communis RepID=B9SQ54_RICCO 0.0
FL-Next: sp=Callose synthase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
uagpf_v2_unigene46604 uagpf v2.0 412
AutoFact: RecName: Full=125 kDa kinesin-related protein dbj|BAA23159.1| TKRP125 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 125 kda kinesin-related 0.0
C-terminus
uagpf_v2_unigene46688 uagpf v2.0 546
AutoFact: pfam01535, PPR, PPR repeat 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.41774e-35
Internal
uagpf_v2_unigene46745 uagpf v2.0 333
AutoFact: Formamidase n=1 Tax=Arabidopsis thaliana RepID=Q9SZE9_ARATH 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: formamidase 7.65788e-21
C-terminus
uagpf_v2_unigene46773 uagpf v2.0 289
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK25939.1|AF360229_1 unknown protein [Arabidopsis thaliana] dbj|BAB11608.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64088.1| unknown protein [Arabidopsis thaliana] gb|AED97903.1| uncharacteri 8.0e-25
FL-Next: tr=Putative uncharacterized protein Sb01g029920; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: leaf senescence related 7.22197e-32
Internal
uagpf_v2_unigene46816 uagpf v2.0 372
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46916 uagpf v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47017 uagpf v2.0 440
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQC9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene47157 uagpf v2.0 316
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 1.63952e-43
Internal
uagpf_v2_unigene47198 uagpf v2.0 408
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene47288 uagpf v2.0 380
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain