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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45494 uagpf v2.0 250
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4A9_RICCO 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.96134e-23
Internal
uagpf_v2_unigene45582 uagpf v2.0 391
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TMK7_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.8026e-45
Internal
uagpf_v2_unigene45598 uagpf v2.0 347
AutoFact: ubiquitin-like modifier-activating enzyme atg7 [Arabidopsis thaliana] sp|Q94CD5.1|ATG7_ARATH RecName: Full=Ubiquitin-like modifier-activating enzyme atg7; AltName: Full=ATG12-activating enzyme E1 atg7; AltName: Full=Autophagy-related protein 7; Short=AtAP 0.0
FL-Next: sp=Ubiquitin-like modifier-activating enzyme atg7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like modifier-activating enzyme atg7-like 0.0
N-terminus
uagpf_v2_unigene45662 uagpf v2.0 256
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.98e-24
Internal
uagpf_v2_unigene45700 uagpf v2.0 337
AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene45762 uagpf v2.0 381
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.45317e-37
N-terminus
uagpf_v2_unigene45777 uagpf v2.0 304
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460 gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.38937e-33
Internal
uagpf_v2_unigene45840 uagpf v2.0 300
AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene45862 uagpf v2.0 339
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g62980-like protein 8.59305e-30
Internal
uagpf_v2_unigene45863 uagpf v2.0 358
AutoFact: UDP-glucoronosyl/UDP-glucosyl transferase family protein 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 8.0444e-30
Internal
uagpf_v2_unigene45889 uagpf v2.0 374
AutoFact: AAA-metalloprotease FtsH [Pisum sativum] 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 3, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46011 uagpf v2.0 322
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic; Flags: Precursor dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene46054 uagpf v2.0 340
AutoFact: Pentatricopeptide, putative n=3 Tax=Oryza sativa RepID=Q10MA5_ORYSJ 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 9.49576e-41
Internal
uagpf_v2_unigene46075 uagpf v2.0 214
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 3.0e-12
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.27249e-15
Internal
uagpf_v2_unigene46152 uagpf v2.0 352
AutoFact: DUF1635 domain containing protein 7.0e-24
Blast2go: protein 1.54593e-19
Coding
uagpf_v2_unigene46165 uagpf v2.0 402
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene46218 uagpf v2.0 429
AutoFact: Putative pentatricopeptide repeat protein n=5 Tax=Malvoideae RepID=B2ZAT1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Internal
uagpf_v2_unigene46304 uagpf v2.0 276
AutoFact: Os02g0565400 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0E0A8_ORYSJ 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.78259e-41
Internal
uagpf_v2_unigene46317 uagpf v2.0 240
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene46337 uagpf v2.0 354
AutoFact: GTP binding protein n=3 Tax=Andropogoneae RepID=B6SXN2_MAIZE 3.0e-28
Blast2go: pentatricopeptide repeat-containing 3.46589e-32
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain