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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene40431 uagpf v2.0 414
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene40444 uagpf v2.0 260
• AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9RVZ6_RICCO 0.0
• FL-Next: sp=Callose synthase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: callose synthase 11-like 0.0
Internal
uagpf_v2_unigene40561 uagpf v2.0 374
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative N-terminus
uagpf_v2_unigene40570 uagpf v2.0 322
• AutoFact: PPR domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene40652 uagpf v2.0 236
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RFB6_RICCO 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene40754 uagpf v2.0 271
• AutoFact: ubiquitin-like modifier-activating enzyme atg7 [Arabidopsis thaliana] sp|Q94CD5.1|ATG7_ARATH RecName: Full=Ubiquitin-like modifier-activating enzyme atg7; AltName: Full=ATG12-activating enzyme E1 atg7; AltName: Full=Autophagy-related protein 7; Short=AtAP 0.0
• FL-Next: sp=Ubiquitin-like modifier-activating enzyme atg7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-like modifier-activating enzyme atg7-like 0.0
Internal
uagpf_v2_unigene40815 uagpf v2.0 411
• AutoFact: RecName: Full=125 kDa kinesin-related protein dbj|BAA23159.1| TKRP125 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 125 kda kinesin-related 0.0
Internal
uagpf_v2_unigene40856 uagpf v2.0 431
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FK33.1|PP427_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50390, chloroplastic; Flags: Precursor dbj|BAB09458.1| selenium-binding protein-like [Arabidopsis thal 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene40920 uagpf v2.0 340
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RY68_RICCO 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.21129e-28
Internal
uagpf_v2_unigene41025 uagpf v2.0 292
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U8_CYCRE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 9.88294e-28
Internal
uagpf_v2_unigene41066 uagpf v2.0 341
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SGQ6.2|PP126_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g76280 gb|AEE35818.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g76280; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.00594e-35
Internal
uagpf_v2_unigene41077 uagpf v2.0 391
• AutoFact: MATE efflux family protein [Arabidopsis thaliana] sp|Q9SYD6.2|MATE1_ARATH RecName: Full=MATE efflux family protein 1; AltName: Full=Aluminum-activated citrate transporter; AltName: Full=FRD-like protein; AltName: Full=MATE citrate transporter; AltName: Fu 0.0
• FL-Next: sp=MATE efflux family protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: mate efflux family protein 0.0
Internal
uagpf_v2_unigene41104 uagpf v2.0 345
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene41125 uagpf v2.0 376
• AutoFact: metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hydrolase-like protein 0.0
C-terminus
uagpf_v2_unigene41126 uagpf v2.0 287
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 3.935e-38
Internal
uagpf_v2_unigene41163 uagpf v2.0 389
• AutoFact: XLG1, extra-large G protein n=2 Tax=Selaginella moellendorffii RepID=D8QZS9_SELML 0.0
• FL-Next: sp=Guanine nucleotide-binding protein alpha-1 subunit; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: extra-large g protein 0.0
Internal
uagpf_v2_unigene41270 uagpf v2.0 364
• AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SUZ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadp-dependent alkenal double bond reductase p2 0.0
N-terminus
uagpf_v2_unigene41286 uagpf v2.0 199
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
• FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: regulatory-associated protein of tor 1-like 0.0
Internal
uagpf_v2_unigene41313 uagpf v2.0 265
• AutoFact: 125 kDa kinesin-related protein n=1 Tax=Nicotiana tabacum RepID=K125_TOBAC 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 125 kda kinesin-related 1.07008e-34
Internal
uagpf_v2_unigene41339 uagpf v2.0 468
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain