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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene18474 uagpf v2.0 819
AutoFact: CBL-interacting protein kinase 04 n=3 Tax=Vitis vinifera RepID=A5BQ82_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbl-interacting serine threonine-protein 0.0
C-terminus
uagpf_v2_unigene18513 uagpf v2.0 784
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
unknown
uagpf_v2_unigene18567 uagpf v2.0 650
AutoFact: DUF296 domain containing protein 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
uagpf_v2_unigene18690 uagpf v2.0 833
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.77342e-21
C-terminus
uagpf_v2_unigene18764 uagpf v2.0 662
AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18806 uagpf v2.0 1391
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Putative N-terminus
uagpf_v2_unigene19120 uagpf v2.0 822
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 9.94922e-44
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transcription factor bhlh63-like 0.0
C-terminus
uagpf_v2_unigene19240 uagpf v2.0 1929
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: flap endonuclease-1 0.0
Complete
uagpf_v2_unigene19475 uagpf v2.0 461
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: flap endonuclease-1 0.0
N-terminus
uagpf_v2_unigene19537 uagpf v2.0 943
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene19675 uagpf v2.0 689
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene19712 uagpf v2.0 869
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene19826 uagpf v2.0 1243
AutoFact: Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG51102.1|AC025295_10 unknown protein [Arabidopsis thaliana] gb|AAK59597.1| unknown protein [Arabidopsis thaliana] gb|AAL34230.1| unknown protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane 0.0
C-terminus
uagpf_v2_unigene19948 uagpf v2.0 345
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at3g12770-like 4.17616e-13
C-terminus
uagpf_v2_unigene19952 uagpf v2.0 743
AutoFact: Early-responsive to dehydration stress protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDK3_PICAB 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized membrane 0.0
Internal
uagpf_v2_unigene20080 uagpf v2.0 1217
AutoFact: RING-H2 subgroup RHE protein [Populus tremula x Populus alba] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
Complete
uagpf_v2_unigene25064 uagpf v2.0 543
AutoFact: Alpha-amylase isozyme 3A n=3 Tax=Oryza sativa RepID=AMY3A_ORYSJ 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase 0.0
C-terminus
uagpf_v2_unigene25070 uagpf v2.0 447
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 3.0e-37
Blast2go: pentatricopeptide repeat-containing 0.0
unknown
uagpf_v2_unigene25079 uagpf v2.0 444
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8VYR5.1|PP351_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g35850, mitochondrial; Flags: Precursor gb|AAL49827.1| unknown protein [Arabidopsis thaliana] gb|AAM142 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g35850, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene25132 uagpf v2.0 474
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain