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Assembly Name: uagpf v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene15808 uagpf v2.0 947
AutoFact: Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG51102.1|AC025295_10 unknown protein [Arabidopsis thaliana] gb|AAK59597.1| unknown protein [Arabidopsis thaliana] gb|AAL34230.1| unknown protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane 0.0
N-terminus
uagpf_v2_unigene15916 uagpf v2.0 664
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 10 0.0
Putative Complete
uagpf_v2_unigene16023 uagpf v2.0 816
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh1 0.0
Complete
uagpf_v2_unigene16190 uagpf v2.0 512
AutoFact: S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] gb|AAK93650.1| unknown protein [Arabidopsis thaliana] gb|AAM67530.1| unknown protein [Arabidopsis thaliana] gb|AEE75944.1| S-adenosyl-L-methionine-dependent methyltran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-methionine-dependent methyltransferase-like protein 0.0
C-terminus
uagpf_v2_unigene16269 uagpf v2.0 489
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
unknown
uagpf_v2_unigene16283 uagpf v2.0 515
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
Blast2go: protein 2.55616e-34
unknown
uagpf_v2_unigene16289 uagpf v2.0 564
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
uagpf_v2_unigene16311 uagpf v2.0 692
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
C-terminus
uagpf_v2_unigene16442 uagpf v2.0 1447
AutoFact: Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG51102.1|AC025295_10 unknown protein [Arabidopsis thaliana] gb|AAK59597.1| unknown protein [Arabidopsis thaliana] gb|AAL34230.1| unknown protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane 0.0
C-terminus
uagpf_v2_unigene16494 uagpf v2.0 569
AutoFact: Peptidase S24, S26A and S26B [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal peptidase complex catalytic subunit sec11a 0.0
C-terminus
uagpf_v2_unigene16532 uagpf v2.0 703
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 9.94922e-44
Blast2go: transcription factor bhlh63-like 0.0
unknown
uagpf_v2_unigene16632 uagpf v2.0 3047
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01176.1| hypothetical protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
uagpf_v2_unigene16760 uagpf v2.0 875
AutoFact: DUF296 multi-domain protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein escarola-like 1.62791e-09
C-terminus
uagpf_v2_unigene17015 uagpf v2.0 938
AutoFact: Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG51102.1|AC025295_10 unknown protein [Arabidopsis thaliana] gb|AAK59597.1| unknown protein [Arabidopsis thaliana] gb|AAL34230.1| unknown protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane 0.0
Putative N-terminus
uagpf_v2_unigene17116 uagpf v2.0 692
AutoFact: dsRNA-binding protein [Brassica oleracea var. gongylodes] emb|CAD59428.1| dsRNA-binding protein [Brassica oleracea var. gemmifera] 7.00649e-44
Blast2go: dsrna-binding protein 0.0
Coding
uagpf_v2_unigene17293 uagpf v2.0 862
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene17400 uagpf v2.0 567
AutoFact: Quinone oxidoreductase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LDI4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-alkenal reductase 0.0
C-terminus
uagpf_v2_unigene17918 uagpf v2.0 763
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] ref|NP_001031806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SZL5.1|PP356_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38150 emb|CAB37 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene18007 uagpf v2.0 709
AutoFact: Predicted membrane protein n=4 Tax=Malpighiales RepID=B9HWL1_POPTR 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene18069 uagpf v2.0 1449
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 8.0e-35
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Spinacia oleracea (Spinach). 0.0
Blast2go: ribosomal protein l12 atp-dependent clp protease adaptor protein 1.33824e-42
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain