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Assembly Name: uagpf v2.0

Name: RNA polymerase II, heptapeptide repeat, eukaryotic

Term: IPR000684  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36727 uagpf v2.0 353
AutoFact: Phosphatidate cytidylyltransferase n=1 Tax=Ricinus communis RepID=B9RXC8_RICCO 0.0
FL-Next: sp=Phosphatidate cytidylyltransferase; Solanum tuberosum (Potato). 0.0
Blast2go: phosphatidate cytidylyltransferase 0.0
Putative N-terminus
uagpf_v2_unigene37795 uagpf v2.0 422
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene38460 uagpf v2.0 336
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene38562 uagpf v2.0 422
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_28.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CTU8_VITVI 2.0e-34
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Blast2go: reticuline oxidase-like 5.47908e-41
Internal
uagpf_v2_unigene39555 uagpf v2.0 413
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Internal
uagpf_v2_unigene40600 uagpf v2.0 293
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Coding
uagpf_v2_unigene42542 uagpf v2.0 255
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Internal
uagpf_v2_unigene42614 uagpf v2.0 435
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta'' 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Internal
uagpf_v2_unigene44685 uagpf v2.0 257
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S1W6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at5g49770-like 0.0
Internal
uagpf_v2_unigene45448 uagpf v2.0 377
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47077 uagpf v2.0 188
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Internal
uagpf_v2_unigene51374 uagpf v2.0 611
AutoFact: WAK-like kinase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wall-associated receptor kinase-like 14-like 0.0
Putative C-terminus
uagpf_v2_unigene51744 uagpf v2.0 510
AutoFact: Phosphatidate cytidylyltransferase n=1 Tax=Ricinus communis RepID=B9RXC8_RICCO 0.0
FL-Next: sp=Phosphatidate cytidylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidate cytidylyltransferase 0.0
C-terminus
uagpf_v2_unigene52527 uagpf v2.0 275
AutoFact: FAD-linked oxidoreductase 1 n=1 Tax=Glycine max RepID=Q2PMD5_SOYBN 7.0e-39
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Blast2go: fad-linked oxidoreductase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain