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Assembly Name: uagpf v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene16 uagpf v2.0 229
AutoFact: octicosapeptide/Phox/Be.1 domain-containing protein kinase [Arabidopsis thaliana] gb|AAD30219.1|AC007202_1 Is a member of the PF|00069 Eukaryotic protein kinase family. ESTs gb|T46484, gb|AF066875 and gb|N96237 come from this gene [Arabidopsis thaliana] g 1.0e-32
Blast2go: serine threonine protein 3.84214e-40
Putative coding
uagpf_v2_unigene197 uagpf v2.0 1593
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene272 uagpf v2.0 373
AutoFact: NAM protein n=1 Tax=Petunia x hybrida RepID=Q40880_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: no apical meristem-related protein 0.0
N-terminus
uagpf_v2_unigene289 uagpf v2.0 1183
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative Complete
uagpf_v2_unigene303 uagpf v2.0 810
AutoFact: putative casein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase 0.0
C-terminus
uagpf_v2_unigene339 uagpf v2.0 693
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
Blast2go: chloride channel protein clc-f-like 0.0
unknown
uagpf_v2_unigene463 uagpf v2.0 683
AutoFact: putative polyamine oxidase precursor [Oryza sativa Japonica Group] dbj|BAD25971.1| putative polyamine oxidase precursor [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Polyamine oxidase; Zea mays (Maize). 0.0
Blast2go: polyamine oxidase 0.0
N-terminus
uagpf_v2_unigene576 uagpf v2.0 352
AutoFact: DUF620 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene577 uagpf v2.0 914
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
C-terminus
uagpf_v2_unigene728 uagpf v2.0 949
AutoFact: phosphatidylinositol 4-kinase [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidylinositol kinase 0.0
C-terminus
uagpf_v2_unigene746 uagpf v2.0 293
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 3.62936e-43
Putative N-terminus
uagpf_v2_unigene1012 uagpf v2.0 1336
AutoFact: Neutral alpha-glucosidase ab, putative n=1 Tax=Ricinus communis RepID=B9STU2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: neutral alpha-glucosidase ab 0.0
C-terminus
uagpf_v2_unigene1094 uagpf v2.0 1165
AutoFact: Cyclin-L1, putative n=1 Tax=Ricinus communis RepID=B9RTZ2_RICCO 0.0
FL-Next: sp=Cyclin-T1-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclin t1 0.0
Internal
uagpf_v2_unigene1188 uagpf v2.0 1323
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cationic amino acid transporter 0.0
Putative N-terminus
uagpf_v2_unigene1481 uagpf v2.0 1298
AutoFact: Neutral alpha-glucosidase ab, putative n=1 Tax=Ricinus communis RepID=B9STU2_RICCO 0.0
FL-Next: tr=Putative alpha-xylosidase; Pinus pinaster (Maritime pine). 0.0
Blast2go: neutral alpha-glucosidase ab 0.0
Putative N-terminus
uagpf_v2_unigene1592 uagpf v2.0 579
AutoFact: ATP binding protein, putative (EC:3.6.4.3) 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene1814 uagpf v2.0 449
AutoFact: oxidoreductase [Arabidopsis thaliana] ref|NP_001078177.1| oxidoreductase [Arabidopsis thaliana] gb|AAK62416.1|AF386971_1 Unknown protein [Arabidopsis thaliana] dbj|BAB02034.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37844.1| At3g18210 [Arabid 0.0
Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Coding
uagpf_v2_unigene1864 uagpf v2.0 1098
AutoFact: Stachyose synthase, putative n=1 Tax=Ricinus communis RepID=B9SXA4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alkaline alpha galactosidase i 0.0
C-terminus
uagpf_v2_unigene1913 uagpf v2.0 1081
AutoFact: calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] ref|NP_001030908.1| calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] emb|CAB94141.1| CaLB protein [Arabidopsis thaliana] gb|AAO42810.1| At3g61 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane single c2 domain protein 0.0
N-terminus
uagpf_v2_unigene1914 uagpf v2.0 2292
AutoFact: Putative glycerol-3-phosphate transporter 4 n=2 Tax=Brassicaceae RepID=GLPT4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycerol-3-phosphate transporter 1-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain