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Assembly Name: uagpf v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene12152 uagpf v2.0 608
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Putative Complete
uagpf_v2_unigene12208 uagpf v2.0 574
AutoFact: exocyst subunit exo70 family protein A1 [Arabidopsis thaliana] emb|CAB83315.1| putative protein [Arabidopsis thaliana] gb|AAL59977.1| unknown protein [Arabidopsis thaliana] gb|AAM91685.1| unknown protein [Arabidopsis thaliana] gb|AED90620.1| exocyst subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12211 uagpf v2.0 1295
AutoFact: alpha-L-fucosidase 3 [Arabidopsis thaliana] sp|Q9FXE5.1|FUCO3_ARATH RecName: Full=Alpha-L-fucosidase 3; AltName: Full=Alpha-1,2-fucosidase; Short=AtFXG1; AltName: Full=Alpha-L-fucoside fucohydrolase 3; Flags: Precursor gb|AAG28886.1|AC008113_2 F12A21.4 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
N-terminus
uagpf_v2_unigene12344 uagpf v2.0 482
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100807419 4.02256e-37
Internal
uagpf_v2_unigene12522 uagpf v2.0 674
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001189878.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK82560.1| AT3g13340/MDC11_13 [Arabidopsis thaliana] gb|AAM98109.1| At3g13340/MDC11_13 [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12523 uagpf v2.0 664
AutoFact: OTU-like cysteine protease family protein [Arabidopsis thaliana] ref|NP_001119168.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AAM64524.1| unknown [Arabidopsis thaliana] dbj|BAD95211.1| hypothetical protein [Arabidopsis thaliana] 0.0
Blast2go: cysteine-type peptidase 0.0
unknown
uagpf_v2_unigene12536 uagpf v2.0 709
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene12611 uagpf v2.0 1344
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: smc3 protein 0.0
Putative Complete
uagpf_v2_unigene12668 uagpf v2.0 349
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Internal
uagpf_v2_unigene12748 uagpf v2.0 668
AutoFact: protein trichome birefringence-like 6 [Arabidopsis thaliana] emb|CAB82953.1| putative protein [Arabidopsis thaliana] gb|AAM61621.1| unknown [Arabidopsis thaliana] dbj|BAF00927.1| hypothetical protein [Arabidopsis thaliana] gb|AEE80346.1| protein trichome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12855 uagpf v2.0 1388
AutoFact: PB1 multi-domain protein 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
C-terminus
uagpf_v2_unigene12953 uagpf v2.0 312
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
Internal
uagpf_v2_unigene13353 uagpf v2.0 460
AutoFact: Apoptosis inhibitory protein 5 (API5) [Arabidopsis thaliana] gb|AAB67622.2| expressed protein [Arabidopsis thaliana] gb|AAM62452.1| unknown [Arabidopsis thaliana] gb|AAN72062.1| expressed protein [Arabidopsis thaliana] gb|AAQ56832.1| At2g34040 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: apoptosis inhibitory protein 5 0.0
Internal
uagpf_v2_unigene13426 uagpf v2.0 619
AutoFact: cysteine proteinase-like protein [Arabidopsis thaliana] gb|AAF14829.1|AC011664_11 unknown protein [Arabidopsis thaliana] gb|AAS76700.1| At3g02070 [Arabidopsis thaliana] gb|AAS92324.1| At3g02070 [Arabidopsis thaliana] dbj|BAH20151.1| AT3G02070 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: otu domain-containing protein ddb_g0284757-like 0.0
N-terminus
uagpf_v2_unigene13434 uagpf v2.0 890
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
C-terminus
uagpf_v2_unigene13552 uagpf v2.0 481
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 0.0
C-terminus
uagpf_v2_unigene13571 uagpf v2.0 785
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene13578 uagpf v2.0 406
AutoFact: FPL domain containing protein 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene13642 uagpf v2.0 528
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.1288e-29
Internal
uagpf_v2_unigene13768 uagpf v2.0 504
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1-associated protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain