Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40885 uagpf v2.0 376
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
Internal
uagpf_v2_unigene40926 uagpf v2.0 361
AutoFact: putative leucine rich repeat protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
uagpf_v2_unigene41024 uagpf v2.0 414
AutoFact: NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] dbj|BAE98871.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28977.1| NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene41094 uagpf v2.0 417
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ 4.0e-22
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.93551e-25
Internal
uagpf_v2_unigene41188 uagpf v2.0 438
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
FL-Next: Isoform 2 of Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F 0.0
Blast2go: chloride channel protein clc-f-like 0.0
Internal
uagpf_v2_unigene41246 uagpf v2.0 539
AutoFact: Putative starch synthase [Oryza sativa Japonica Group] gb|EAZ25012.1| hypothetical protein OsJ_08794 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Starch synthase VI; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: soluble starch synthase iv-1 0.0
Internal
uagpf_v2_unigene41343 uagpf v2.0 260
AutoFact: RecName: Full=Cyclin-T1-3; Short=CycT1;3 gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa Japonica Group] gb|EEC67709.1| hypothetical protein OsI_35185 [Oryza sativa Indica Group] 3.0e-13
Blast2go: protein 1.29926e-21
unknown
uagpf_v2_unigene41348 uagpf v2.0 328
AutoFact: N2227-like domain-containing protein [Arabidopsis thaliana] gb|AAM13869.1| unknown protein [Arabidopsis thaliana] gb|AAM91702.1| unknown protein [Arabidopsis thaliana] gb|AEC08644.1| N2227-like domain-containing protein [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 9.76577e-36
Internal
uagpf_v2_unigene41468 uagpf v2.0 280
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 4.6929e-13
Internal
uagpf_v2_unigene41557 uagpf v2.0 422
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 3.0e-32
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Blast2go: gag protein 5.86802e-32
Internal
uagpf_v2_unigene41621 uagpf v2.0 442
AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: mrna 3 -end-processing protein rna14 0.0
Putative N-terminus
uagpf_v2_unigene41665 uagpf v2.0 332
AutoFact: oligopeptidase B [Arabidopsis thaliana] gb|AAD50051.1|AC007980_16 Similar to oligopeptidases [Arabidopsis thaliana] gb|AAL84967.1| At1g50380/F14I3_27 [Arabidopsis thaliana] gb|AEE32542.1| oligopeptidase B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: oligopeptidase b 0.0
Internal
uagpf_v2_unigene41676 uagpf v2.0 390
AutoFact: OSIGBa0101K10.6 protein n=1 Tax=Oryza sativa RepID=Q01MA8_ORYSA 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.0216e-26
Putative Complete
uagpf_v2_unigene41731 uagpf v2.0 395
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.5685e-16
N-terminus
uagpf_v2_unigene41805 uagpf v2.0 422
AutoFact: PREDICTED: similar to Callose synthase 10 n=1 Tax=Vitis vinifera RepID=UPI0001985174 2.00386e-43
FL-Next: sp=Callose synthase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 10 4.09179e-43
Internal
uagpf_v2_unigene41812 uagpf v2.0 377
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: at1g14850-like protein 0.0
Internal
uagpf_v2_unigene41919 uagpf v2.0 327
AutoFact: OSJNBb0049I21.5 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XRV6_ORYSJ 3.0e-22
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 4.15575e-22
Putative C-terminus
uagpf_v2_unigene41928 uagpf v2.0 436
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 9.99967e-42
FL-Next: tr=Putative gag-pol polyprotein; Petunia hybrida (Petunia). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
uagpf_v2_unigene41973 uagpf v2.0 419
AutoFact: putative leucine rich repeat protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
uagpf_v2_unigene42035 uagpf v2.0 410
AutoFact: Wax2_C multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein wax2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain