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Assembly Name: uagpf v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene34941 uagpf v2.0 393
AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 4.0e-35
FL-Next: tr=Pol protein; Cucumis melo subsp. melo. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.68007e-40
Internal
uagpf_v2_unigene35266 uagpf v2.0 372
AutoFact: RecName: Full=Cyclin-T1-3; Short=CycT1;3 gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa Japonica Group] gb|EEC67709.1| hypothetical protein OsI_35185 [Oryza sativa Indica Group] 3.0e-13
FL-Next: sp=Cyclin-T1-4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 1.29926e-21
N-terminus
uagpf_v2_unigene35328 uagpf v2.0 174
AutoFact: polyamine oxidase [Zea mays] 1.0e-37
FL-Next: sp=Polyamine oxidase; Zea mays (Maize). 0.0
Blast2go: polyamine oxidase 0.0
Internal
uagpf_v2_unigene35360 uagpf v2.0 361
AutoFact: Cinnamoyl-CoA reductase n=1 Tax=Codonopsis lanceolata RepID=Q2WFL1_9ASTR 8.0e-19
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 1.07299e-36
Putative N-terminus
uagpf_v2_unigene35423 uagpf v2.0 230
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: integrase 1.36968e-32
Internal
uagpf_v2_unigene35463 uagpf v2.0 344
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: Isoform 2 of Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B 0.0
Blast2go: dynamin-related protein 3a-like 0.0
N-terminus
uagpf_v2_unigene35569 uagpf v2.0 233
AutoFact: hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] emb|CAB86039.1| putative protein [Arabidopsis thaliana] gb|AED90527.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] 6.0e-05
Blast2go: uncharacterized protein loc100812941 1.68156e-44
unknown
uagpf_v2_unigene35859 uagpf v2.0 431
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.4013e-45
Complete
uagpf_v2_unigene35937 uagpf v2.0 325
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene35945 uagpf v2.0 432
AutoFact: putative reverse-transcriptase-like protein [Arabidopsis thaliana] emb|CAB78181.1| putative reverse-transcriptase-like protein [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse-transcriptase-like protein 3.63293e-32
Putative Complete
uagpf_v2_unigene36111 uagpf v2.0 1107
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAF05853.1|AC011698_4 putative casein kinase [Arabidopsis thaliana] gb|AEE74014.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family expressed 0.0
C-terminus
uagpf_v2_unigene36131 uagpf v2.0 709
AutoFact: Os01g0744300 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0JJE0_ORYSJ 1.0e-35
Blast2go: serine threonine protein kinase 1.58853e-38
unknown
uagpf_v2_unigene36203 uagpf v2.0 633
AutoFact: exocyst subunit exo70 family protein A1 [Arabidopsis thaliana] emb|CAB83315.1| putative protein [Arabidopsis thaliana] gb|AAL59977.1| unknown protein [Arabidopsis thaliana] gb|AAM91685.1| unknown protein [Arabidopsis thaliana] gb|AED90620.1| exocyst subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene36239 uagpf v2.0 487
AutoFact: [R] COG5415 Predicted integral membrane metal-binding protein 4.0e-05
Blast2go: uncharacterized protein at2g24330-like 0.0
unknown
uagpf_v2_unigene36268 uagpf v2.0 621
AutoFact: putative protein kinase [Arabidopsis thaliana] gb|AAC04483.1| putative protein kinase [Arabidopsis thaliana] 1.0e-37
FL-Next: sp=Receptor like protein kinase S.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor like protein kinase -like 0.0
C-terminus
uagpf_v2_unigene36417 uagpf v2.0 395
AutoFact: F-box protein At-B [Arabidopsis thaliana] sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box protein At-B gb|AAF79512.1|AC002328_20 F20N2.2 [Arabidopsis thaliana] gb|AAM26672.1| At1g55590/F20N2_18 [Arabidopsis thaliana] gb|AAN46816.1| At1g55590/F20N2_18 [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at-b-like 0.0
Putative N-terminus
uagpf_v2_unigene36627 uagpf v2.0 548
AutoFact: F-box protein At-B [Arabidopsis thaliana] sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box protein At-B gb|AAF79512.1|AC002328_20 F20N2.2 [Arabidopsis thaliana] gb|AAM26672.1| At1g55590/F20N2_18 [Arabidopsis thaliana] gb|AAN46816.1| At1g55590/F20N2_18 [Arabidops 0.0
FL-Next: sp=F-box protein At-B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at-b-like 0.0
C-terminus
uagpf_v2_unigene36751 uagpf v2.0 393
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9S058_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase 0.0
Internal
uagpf_v2_unigene36834 uagpf v2.0 426
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene36889 uagpf v2.0 461
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 7.86207e-38
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain