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Assembly Name: uagpf v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1055 uagpf v2.0 1610
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
C-terminus
uagpf_v2_unigene2132 uagpf v2.0 1335
AutoFact: PLENA protein n=2 Tax=Antirrhineae RepID=Q41195_ANTMA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plena protein 0.0
Putative Complete
uagpf_v2_unigene3246 uagpf v2.0 1732
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Complete
uagpf_v2_unigene10076 uagpf v2.0 1385
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
Complete
uagpf_v2_unigene10975 uagpf v2.0 224
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: abc transporter-like protein 0.0
C-terminus
uagpf_v2_unigene28039 uagpf v2.0 509
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
N-terminus
uagpf_v2_unigene29438 uagpf v2.0 355
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
Internal
uagpf_v2_unigene30577 uagpf v2.0 362
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
unknown
uagpf_v2_unigene32039 uagpf v2.0 443
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
Blast2go: serine hydroxymethyltransferase 6.39327e-39
Coding
uagpf_v2_unigene39665 uagpf v2.0 518
AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 6.0e-23
Blast2go: dal3 protein 3.45172e-28
unknown
uagpf_v2_unigene43744 uagpf v2.0 263
AutoFact: MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE 2.0e-17
Blast2go: mads-box protein jointless-like 4.14309e-22
unknown
uagpf_v2_unigene44437 uagpf v2.0 372
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box domain-containing protein 1.4013e-45
N-terminus
uagpf_v2_unigene53598 uagpf v2.0 276
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
Internal
uagpf_v2_unigene54360 uagpf v2.0 488
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
C-terminus
uagpf_v2_unigene54554 uagpf v2.0 550
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain