Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene28110 uagpf v2.0 376
AutoFact: RVT_1 domain containing protein 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac051624_3 retroelement 0.0
Putative Complete
uagpf_v2_unigene28151 uagpf v2.0 546
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene28204 uagpf v2.0 386
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-like protein 12-like 0.0
C-terminus
uagpf_v2_unigene28689 uagpf v2.0 371
AutoFact: Glycerophosphoryl diester phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9SSQ8_RICCO 0.0
FL-Next: sp=Probable glycerophosphoryl diester phosphodiesterase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glycerophosphoryl diester phosphodiesterase family protein 0.0
Internal
uagpf_v2_unigene28733 uagpf v2.0 514
AutoFact: pleckstrin homology and lipid-binding START domain-containing protein [Arabidopsis thaliana] gb|AAL57642.1| AT5g45560/MFC19_23 [Arabidopsis thaliana] gb|AED95268.1| pleckstrin homology and lipid-binding START domain-containing protein [Arabidopsis thalian 6.0e-23
Blast2go: protein 4.54826e-28
unknown
uagpf_v2_unigene28790 uagpf v2.0 501
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: retrotransposon protein 0.0
Internal
uagpf_v2_unigene28808 uagpf v2.0 433
AutoFact: RVT_1 domain containing protein 3.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: ac051624_3 retroelement 0.0
N-terminus
uagpf_v2_unigene29100 uagpf v2.0 291
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
Blast2go: cll1b clavata1-like receptor s t protein kinase protein 0.0
unknown
uagpf_v2_unigene29182 uagpf v2.0 355
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-like protein kinase 0.0
Putative N-terminus
uagpf_v2_unigene29322 uagpf v2.0 495
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9T5A9_RICCO 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 1.0657e-29
Internal
uagpf_v2_unigene29332 uagpf v2.0 420
AutoFact: glycerol-3-phosphate acyltransferase 6 [Arabidopsis thaliana] sp|O80437.1|GPAT6_ARATH RecName: Full=Glycerol-3-phosphate acyltransferase 6; Short=AtGPAT6 gb|AAC27160.1| unknown protein [Arabidopsis thaliana] gb|AAL32799.1| Unknown protein [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene29366 uagpf v2.0 497
AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] sp|Q9FMY1.1|C86B1_ARATH RecName: Full=Cytochrome P450 86B1 gb|AAK29622.1|AF345898_1 CYP86B1 [Arabidopsis thaliana] dbj|BAB11174.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN72056.1| cytochrome P4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 86b1 0.0
C-terminus
uagpf_v2_unigene29528 uagpf v2.0 256
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUH7_ORYSJ 6.0e-23
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 8.9018e-26
Putative N-terminus
uagpf_v2_unigene29788 uagpf v2.0 578
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: uncharacterized protein loc100780312 0.0
Internal
uagpf_v2_unigene30035 uagpf v2.0 356
AutoFact: RVT_1 domain containing protein 5.0e-16
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein partial 6.78913e-33
Putative C-terminus
uagpf_v2_unigene30330 uagpf v2.0 506
AutoFact: [C] COG0584 Glycerophosphoryl diester phosphodiesterase 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene30386 uagpf v2.0 381
AutoFact: rve domain containing protein 3.0e-26
FL-Next: tr=Retrotransposon gag protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: hypothetical protein VITISV_040269 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene30508 uagpf v2.0 268
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
unknown
uagpf_v2_unigene30640 uagpf v2.0 234
AutoFact: vesicle-associated membrane protein-associated protein [Triticum aestivum] 0.0
Blast2go: vesicle-associated membrane 0.0
unknown
uagpf_v2_unigene30888 uagpf v2.0 490
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNW7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kinase domain-containing protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain