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Assembly Name: uagpf v2.0

Name: BRCT domain

Term: IPR001357  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40705 uagpf v2.0 505
AutoFact: Protein kinase [Medicago truncatula] 0.0
Blast2go: protein kinase 0.0
unknown
uagpf_v2_unigene41021 uagpf v2.0 813
AutoFact: BRCT domain-containing DNA repair protein [Arabidopsis thaliana] gb|AAT68748.1| hypothetical protein At3g43930 [Arabidopsis thaliana] gb|AEE77846.1| BRCT domain-containing DNA repair protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna topoisomerase 2-binding protein 0.0
Internal
uagpf_v2_unigene41590 uagpf v2.0 287
AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
uagpf_v2_unigene41998 uagpf v2.0 443
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene42092 uagpf v2.0 314
AutoFact: WS02827.CR_K08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02827_K08 3', mRNA sequence. 0.0
FL-Next: sp=Serine/threonine-protein kinase CTR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein kinase ctr1-like 0.0
Internal
uagpf_v2_unigene42318 uagpf v2.0 266
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.21322e-24
Internal
uagpf_v2_unigene43927 uagpf v2.0 171
AutoFact: copia-type reverse transcriptase-like protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.58732e-43
Internal
uagpf_v2_unigene44211 uagpf v2.0 323
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.1108e-37
Internal
uagpf_v2_unigene44875 uagpf v2.0 360
AutoFact: Unassigned protein
FL-Next: tr=SDL-1 protein; Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco). 0.0
Blast2go: sdl-1 protein 0.0
Internal
uagpf_v2_unigene45045 uagpf v2.0 469
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene45095 uagpf v2.0 303
AutoFact: RVT_2 domain containing protein 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_004365 [Vitis vinifera] 6.7487e-21
Internal
uagpf_v2_unigene46067 uagpf v2.0 349
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.75755e-19
C-terminus
uagpf_v2_unigene46437 uagpf v2.0 320
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 1-like 0.0
Internal
uagpf_v2_unigene46543 uagpf v2.0 213
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.71458e-36
Internal
uagpf_v2_unigene47895 uagpf v2.0 115
AutoFact: replication factor C 110 kDa subunit [Oryza sativa Japonica Group] 0.0
Blast2go: replication factor c subunit 1-like 0.0
unknown
uagpf_v2_unigene49193 uagpf v2.0 308
AutoFact: CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
N-terminus
uagpf_v2_unigene49514 uagpf v2.0 438
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 3.31718e-37
N-terminus
uagpf_v2_unigene50168 uagpf v2.0 336
AutoFact: Unassigned protein
Blast2go: dna topoisomerase 2-binding protein 0.0
unknown
uagpf_v2_unigene50302 uagpf v2.0 451
AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Internal
uagpf_v2_unigene50318 uagpf v2.0 391
AutoFact: DNA damage signaling and repair protein n=2 Tax=Andropogoneae RepID=Q0MVR3_MAIZE 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100501841 1.24874e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain