Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Ribosomal protein S5 domain 2-type fold, subgroup

Term: IPR014721  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene103 uagpf v2.0 750
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
N-terminus
uagpf_v2_unigene166 uagpf v2.0 1107
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ghmp kinase family protein 0.0
Complete
uagpf_v2_unigene186 uagpf v2.0 235
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 7.22131e-26
C-terminus
uagpf_v2_unigene261 uagpf v2.0 1622
AutoFact: arabinose kinase [Arabidopsis thaliana] sp|O23461.1|ARAK_ARATH RecName: Full=L-arabinokinase; Short=AtISA1 emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana] emb|CAB78655.1| galactokinase like protein [Arabidopsis thaliana] gb|AEE83696.1| a 0.0
FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: galactokinase like protein 0.0
C-terminus
uagpf_v2_unigene533 uagpf v2.0 425
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2I7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphomevalonate kinase 0.0
N-terminus
uagpf_v2_unigene1592 uagpf v2.0 579
AutoFact: ATP binding protein, putative (EC:3.6.4.3) 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene1661 uagpf v2.0 667
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene1736 uagpf v2.0 331
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene2751 uagpf v2.0 532
AutoFact: F13O11.18 protein n=1 Tax=Arabidopsis thaliana RepID=Q9XIQ8_ARATH 5.0e-30
FL-Next: tr=F13O11.18 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosomal protein s5 family protein 1.73264e-34
Internal
uagpf_v2_unigene2925 uagpf v2.0 1154
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s5 family protein 0.0
C-terminus
uagpf_v2_unigene3002 uagpf v2.0 343
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4527 uagpf v2.0 1356
AutoFact: putative 30S ribosomal protein S9 [Oryza sativa Japonica Group] dbj|BAD31103.1| putative 30S ribosomal protein S9 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s9 0.0
Complete
uagpf_v2_unigene4853 uagpf v2.0 709
AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase 6 subunit b 0.0
C-terminus
uagpf_v2_unigene5189 uagpf v2.0 699
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
C-terminus
uagpf_v2_unigene5419 uagpf v2.0 1287
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene5910 uagpf v2.0 571
AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 0.0
N-terminus
uagpf_v2_unigene6342 uagpf v2.0 608
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2I7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphomevalonate kinase 0.0
N-terminus
uagpf_v2_unigene6716 uagpf v2.0 566
AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s16 0.0
Putative Complete
uagpf_v2_unigene6747 uagpf v2.0 889
AutoFact: Vacuolar protein sorting factor 4B-like n=4 Tax=Poaceae RepID=Q5QMP6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p60 atpase-containing subunit a-like 2-like 0.0
Putative C-terminus
uagpf_v2_unigene6979 uagpf v2.0 646
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2I7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb01g040900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: phosphomevalonate kinase 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain