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Assembly Name: uagpf v2.0

Name: Extracellular solute-binding protein, family 3, conserved site

Term: IPR018313  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45 uagpf v2.0 586
AutoFact: plasma membrane protein 3 [Leymus chinensis] 2.0e-20
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 3.83168e-32
Complete
uagpf_v2_unigene8757 uagpf v2.0 1123
AutoFact: emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] gb|AAF13086.1|AC009176_13 putative coated vesicle membrane protein [Arabidopsis thaliana] gb|AAF21178.1|AC013483_2 putative coated vesicle membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane emp24 domain-containing protein 0.0
Complete
uagpf_v2_unigene9449 uagpf v2.0 813
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mscs-like 2 protein 0.0
C-terminus
uagpf_v2_unigene16437 uagpf v2.0 854
AutoFact: plasma membrane protein 3 [Leymus chinensis] 9.0e-19
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 2.31004e-31
Complete
uagpf_v2_unigene19415 uagpf v2.0 619
AutoFact: Hydrophobic protein LTI6A, putative 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rare cold inducible protein 1.32923e-17
Complete
uagpf_v2_unigene19724 uagpf v2.0 410
AutoFact: Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI 4.0e-17
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 8.84159e-23
Complete
uagpf_v2_unigene19904 uagpf v2.0 720
AutoFact: Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI 5.0e-12
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 2.38147e-15
Complete
uagpf_v2_unigene20043 uagpf v2.0 668
AutoFact: Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI 1.0e-14
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 4.45205e-19
Complete
uagpf_v2_unigene20051 uagpf v2.0 569
AutoFact: Stress-induced hydrophobic peptide n=1 Tax=Populus trichocarpa RepID=B9N409_POPTR 3.0e-11
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 8.34854e-17
Complete
uagpf_v2_unigene20076 uagpf v2.0 566
AutoFact: plasma membrane protein 3 [Leymus chinensis] 4.0e-15
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 2.13532e-25
Complete
uagpf_v2_unigene20090 uagpf v2.0 524
AutoFact: Stress-induced hydrophobic peptide n=1 Tax=Populus trichocarpa RepID=B9N409_POPTR 9.0e-11
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydrophobic protein lti6a 1.21266e-14
Complete
uagpf_v2_unigene20372 uagpf v2.0 593
AutoFact: plasma membrane protein 3 [Leymus chinensis] 5.0e-20
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 5.316e-30
Complete
uagpf_v2_unigene25669 uagpf v2.0 411
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mscs-like 2 protein 0.0
Internal
uagpf_v2_unigene27568 uagpf v2.0 595
AutoFact: Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] emb|CAB71880.1| putative protein [Arabidopsis thaliana] gb|AEE80322.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene27691 uagpf v2.0 376
AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
N-terminus
uagpf_v2_unigene31872 uagpf v2.0 983
AutoFact: emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] gb|AAF13086.1|AC009176_13 putative coated vesicle membrane protein [Arabidopsis thaliana] gb|AAF21178.1|AC013483_2 putative coated vesicle membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane emp24 domain-containing protein 0.0
Complete
uagpf_v2_unigene33736 uagpf v2.0 246
AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Coding
uagpf_v2_unigene36948 uagpf v2.0 402
AutoFact: Rare cold inducible protein (Fragment) n=4 Tax=Pinaceae RepID=C6FC72_PSEMZ 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 8.0931e-23
Complete
uagpf_v2_unigene45982 uagpf v2.0 289
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=Putative uncharacterized protein F12B17_160; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mscs-like 2 protein 6.74866e-17
Internal
uagpf_v2_unigene47989 uagpf v2.0 307
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain