Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene577 uagpf v2.0 914
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
C-terminus
uagpf_v2_unigene1733 uagpf v2.0 404
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: transducin beta-like protein 3-like 0.0
unknown
uagpf_v2_unigene2392 uagpf v2.0 1483
AutoFact: polygalacturonase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
uagpf_v2_unigene4546 uagpf v2.0 566
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
uagpf_v2_unigene5282 uagpf v2.0 741
AutoFact: Sucrose transporter-like protein n=4 Tax=Solanum RepID=Q7Y1Q0_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose transporter-like protein 0.0
C-terminus
uagpf_v2_unigene5467 uagpf v2.0 562
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 0.0
Blast2go: protein early flowering 1.76884e-14
N-terminus
uagpf_v2_unigene5633 uagpf v2.0 750
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6688 uagpf v2.0 758
AutoFact: sucrose carrier [Ricinus communis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6793 uagpf v2.0 582
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
uagpf_v2_unigene7300 uagpf v2.0 1521
AutoFact: Lysine/histidine transporter n=2 Tax=Populus trichocarpa RepID=B9HJ04_POPTR 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine histidine transporter 1.95297e-32
C-terminus
uagpf_v2_unigene7632 uagpf v2.0 437
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
Blast2go: transparent testa 12 0.0
Coding
uagpf_v2_unigene8046 uagpf v2.0 388
AutoFact: MatE domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 1.82448e-21
N-terminus
uagpf_v2_unigene8264 uagpf v2.0 335
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-13
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Internal
uagpf_v2_unigene8285 uagpf v2.0 865
AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectinesterase 0.0
C-terminus
uagpf_v2_unigene9350 uagpf v2.0 1812
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
Putative C-terminus
uagpf_v2_unigene9496 uagpf v2.0 384
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
Internal
uagpf_v2_unigene10233 uagpf v2.0 359
AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10614 uagpf v2.0 311
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-13
Blast2go: rcc1 and btb domain-containing protein 0.0
unknown
uagpf_v2_unigene11200 uagpf v2.0 655
AutoFact: Sucrose transporter n=1 Tax=Vitis vinifera RepID=Q8W534_VITVI 2.0e-32
FL-Next: sp=Sucrose transport protein; Spinacia oleracea (Spinach). 0.0
Blast2go: sucrose transporter 3.57611e-42
Putative N-terminus
uagpf_v2_unigene12495 uagpf v2.0 654
AutoFact: histidine amino acid transporter [Oryza sativa Indica Group] 0.0
FL-Next: sp=Lysine histidine transporter-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine histidine transporter 1-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain