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Assembly Name: uagpf v2.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene12953 uagpf v2.0 312
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
Internal
uagpf_v2_unigene14733 uagpf v2.0 715
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene15027 uagpf v2.0 1168
AutoFact: histidine amino acid transporter [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine histidine transporter 1-like 0.0
Putative C-terminus
uagpf_v2_unigene15167 uagpf v2.0 371
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
C-terminus
uagpf_v2_unigene16645 uagpf v2.0 1825
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 0.0
Complete
uagpf_v2_unigene18862 uagpf v2.0 1046
AutoFact: Pectinesterase n=3 Tax=Oryza sativa RepID=B9EVS6_ORYSJ 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectinesterase ppe8b precursor 0.0
C-terminus
uagpf_v2_unigene25262 uagpf v2.0 541
AutoFact: Ribosome-binding factor A, putative n=1 Tax=Ricinus communis RepID=B9RG62_RICCO 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene25769 uagpf v2.0 524
AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene26976 uagpf v2.0 250
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Internal
uagpf_v2_unigene27252 uagpf v2.0 447
AutoFact: early-responsive to dehydration stress-related protein [Arabidopsis thaliana] dbj|BAB02357.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76531.1| early-responsive to dehydration stress-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized membrane 0.0
N-terminus
uagpf_v2_unigene28223 uagpf v2.0 336
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Internal
uagpf_v2_unigene28246 uagpf v2.0 372
AutoFact: Pectinesterase n=3 Tax=Oryza sativa RepID=B9EVS6_ORYSJ 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectinesterase ppe8b precursor 0.0
Internal
uagpf_v2_unigene28950 uagpf v2.0 282
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
C-terminus
uagpf_v2_unigene29102 uagpf v2.0 284
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=ERD (Early-responsive to dehydration stress) family protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene29111 uagpf v2.0 489
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AEE30369.1| MATE efflux family protein [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mate efflux family protein 1.44256e-38
C-terminus
uagpf_v2_unigene29306 uagpf v2.0 265
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Internal
uagpf_v2_unigene29918 uagpf v2.0 439
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
Internal
uagpf_v2_unigene30224 uagpf v2.0 504
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase-like protein 0.0
C-terminus
uagpf_v2_unigene33870 uagpf v2.0 445
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene34551 uagpf v2.0 327
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain